Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 192 a.a., transcription termination/antitermination factor NusG from Bacteroides ovatus ATCC 8483

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 15/178 (8%)

Query: 4   APKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSERK 63
           A  KRWYV       E +VA+ L         +++  E  VP ++ +   + +R+  E  
Sbjct: 22  AHSKRWYVALVRMHHEKKVAERL---------DKMGIENFVPVQQEIHQWSDRRKVVESV 72

Query: 64  FFPGYVLVQMIMNDESWHL-VRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEA- 121
             P  V V +   +    L   +V R M   G +S  PA I D++       L+ + EA 
Sbjct: 73  LLPMMVFVHVNPKERKEVLGFSTVSRYMVMRGESS--PAVIPDEQMARFRFMLDYSEEAI 130

Query: 122 PRPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVE 179
               +    GE VRV  GP     G +  VD  KS++ V +++ G A  V +  G VE
Sbjct: 131 CMNSSPLARGEKVRVVKGPLTGLVGELVNVD-GKSKIAVRLNMLGCAC-VNMPIGYVE 186