Pairwise Alignments

Query, 182 a.a., transcription termination/antitermination protein NusG from Vibrio cholerae E7946 ATCC 55056

Subject, 183 a.a., hypothetical protein from Alteromonas macleodii MIT1002

 Score =  290 bits (741), Expect = 1e-83
 Identities = 140/178 (78%), Positives = 160/178 (89%)

Query: 3   EAPKKRWYVVQAFSGFEGRVAQSLREHIKMHGMEELFGEVLVPTEEVVEMRAGQRRKSER 62
           EA KKRWYVVQA+S +E RV ++L E+IKMH ME+ FG+VLVPTEEVVEMRAGQ+RKSER
Sbjct: 5   EAVKKRWYVVQAYSQYESRVKKTLLEYIKMHNMEDYFGQVLVPTEEVVEMRAGQKRKSER 64

Query: 63  KFFPGYVLVQMIMNDESWHLVRSVPRVMGFIGGTSDRPAPITDKEADAILNRLEKASEAP 122
           KF+PGYVLV+M M +ESWHLV+SVPRV+GFIGGTSDRP PIT KEADAILNRLE+  + P
Sbjct: 65  KFYPGYVLVEMAMTEESWHLVKSVPRVLGFIGGTSDRPMPITQKEADAILNRLEENVDKP 124

Query: 123 RPKTMFEAGEVVRVNDGPFADFNGTVEEVDYEKSRLKVSVSIFGRATPVELEFGQVEK 180
           RPKT+FE GEV+RV DGPFADFNG VEEVDYEKSR+KVSV IFGR+TPV+LEFGQVEK
Sbjct: 125 RPKTLFEPGEVIRVIDGPFADFNGVVEEVDYEKSRVKVSVLIFGRSTPVDLEFGQVEK 182