Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 635 a.a., Selenocysteine-specific translation elongation factor from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 4e-36
 Identities = 109/374 (29%), Positives = 169/374 (45%), Gaps = 35/374 (9%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDTPN 74
           +GT GH+DHGKTTL  A+  V               D  PEE+ RGI+I   +     P+
Sbjct: 3   IGTAGHIDHGKTTLVRALTGV-------------DTDRLPEEKRRGISIELGYAYLHAPD 49

Query: 75  R-HYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYIIV 133
                 VD PGH   +  M+ GA  +D  +LVVAA DG MPQTREH+ +   +G+    V
Sbjct: 50  GVSLGFVDVPGHERLLHTMLAGATGIDHALLVVAADDGVMPQTREHLAVVALLGVREATV 109

Query: 134 FMNKCDMVDD---EELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIV 190
            + K D +D+   E  L  V  ++  LL+     G   P++   A+ A  GE      + 
Sbjct: 110 AITKIDRIDESMREARLAEVRSDIAALLAPTPLAG--APML---AVSATTGEG-----VD 159

Query: 191 ELAE-ALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIK 249
            L E  LD       R  D+AF + ++  F++ G GTVVTG +  G +++GDE+ +V   
Sbjct: 160 TLRERLLDVASKARAREDDLAFRLAVDRAFTLSGVGTVVTGTVFSGTVRIGDELRVVPGD 219

Query: 250 ETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKREEVERGQVLAKPGSITPHTKFESEV 309
            +V+    G+    +  +   AG+     L G  ++E+ RG  +  P +I   T     +
Sbjct: 220 RSVRV--RGIHAQNQKAESAHAGQRCALALAGVTKDEMHRGDWVCAP-AIALATDRIDVL 276

Query: 310 YVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPIAM 369
             L  DE     P   G     +   +DV  S+ L +  + + PG+     +     +  
Sbjct: 277 LTLWPDEA---KPLRSGTTVHAHLGASDVMASLALLDR-DALAPGETALAQLVTKESVGA 332

Query: 370 DEGLRFAIREGGRT 383
             G R  +R+   T
Sbjct: 333 WHGDRGVLRDASAT 346