Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., selenocysteyl-tRNA-specific translation elongation factor from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 2e-36
 Identities = 119/384 (30%), Positives = 184/384 (47%), Gaps = 42/384 (10%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSH----VEY 70
           VGT GH+DHGKT L  A+         G+A D        EER RG+TI+  +    +  
Sbjct: 3   VGTAGHIDHGKTALLLALT--------GQAGD-----QRQEERARGMTIDLGYRYAALSE 49

Query: 71  DTPNRHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPY 130
             P   +  +D PGH  ++ NM+ GA  +D  +LVVAA DG MPQTREH+ +   +GIP 
Sbjct: 50  GAPLTGF--IDVPGHERFIHNMLAGAHGIDLVLLVVAADDGVMPQTREHLAIIELLGIPQ 107

Query: 131 IIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIV 190
            +V ++KCD V+   L E V+M+V ELL+   + G      +   L +++GE      + 
Sbjct: 108 ALVAISKCDRVEPSRLAE-VQMQVSELLAPGPYAG-----ARQFPLSSISGEG-----VD 156

Query: 191 ELAEA-LDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIK 249
            L +A L+      +R+V   F + ++  F++ G G VVTG    G +  GD + +    
Sbjct: 157 ALRQALLEAEAGTRQRSVVGGFRLAVDRAFAVTGAGVVVTGTALAGRVSAGDTLLLGKAG 216

Query: 250 ETVKTTCTGVEMFRKLLDEGRAGENVGALLRGTKR--EEVERGQVLAKPGSITPHTKFES 307
           + V+      +    L+ E  AG+ V   +   +   E+V RG  L       P  + + 
Sbjct: 217 KVVRVRGLHAQNQAALVAE--AGQRVALNIAAERLAVEQVHRGDWLVPEWLHAPSVRVDI 274

Query: 308 EVYVLSKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPI 367
           E+Y+L  ++  R    F       +  T DVT  + L EG E +  G  +   + L AP+
Sbjct: 275 ELYLLPDEK--RAFEHFSAV--HVHLGTQDVTARVALLEG-ESLAAGQRMFAQLLLNAPL 329

Query: 368 AMDEGLRFAIRE--GGRTVGAGVV 389
               G R  +R+    RT+G G V
Sbjct: 330 QAVHGDRLVLRDQRAQRTLGGGKV 353