Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 616 a.a., Selenocysteine-specific translation elongation factor from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  127 bits (319), Expect = 9e-34
 Identities = 110/369 (29%), Positives = 167/369 (45%), Gaps = 43/369 (11%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDTPN 74
           + T GHVDHGKTTL  AI  V A             D  PEE++RG+TI+  +  +  P+
Sbjct: 3   IATAGHVDHGKTTLLQAITGVNA-------------DRLPEEKKRGMTIDLGYAYWPQPD 49

Query: 75  -RHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYIIV 133
            R    +D PGH  ++ NM+ G   +D  +LVVA  DG M QTREH+ + +  G   + V
Sbjct: 50  GRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLQILQLTGNLQLTV 109

Query: 134 FMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIVELA 193
            + K D VD+  + E+ E EV   L  Y F    L V   +A     G A+  A + +L 
Sbjct: 110 ALTKADRVDEARIGEVRE-EVLAALDNYGFADTVLFV---TAANEGRGIAELRAHLQQL- 164

Query: 194 EALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIKETVK 253
                  P    A    F + I+  F+++G G VVTG    G + VGD + + G+   ++
Sbjct: 165 -------PARSHAAQHRFRLAIDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNTPMR 217

Query: 254 TTCTGVEMFRKLLDEGRAGENVGALLRG-TKREEVERGQVLAKPGSITPHTKFESEVYVL 312
                 +   +  D   AG+ +   + G  ++E++ RG  L    S  P  +  S V V 
Sbjct: 218 VRSLHAQ--NQPTDHAYAGQRIALNIAGDAEKEQLNRGDWLL---SDAPVGEAFSRVIV- 271

Query: 313 SKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEG--VEMVMP-----GDNVKMVVDLIA 365
                  H P  +      +   + VTG + L EG   E++        DN ++V+  I+
Sbjct: 272 ---SLALHAPLSQWQPLHIHHAASHVTGRVSLLEGGLAELIFDTPLWLADNDRLVLRDIS 328

Query: 366 PIAMDEGLR 374
             A   G R
Sbjct: 329 ARATLAGAR 337