Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 615 a.a., selenocysteine-specific elongation factor SelB from Enterobacter asburiae PDN3

 Score =  128 bits (322), Expect = 4e-34
 Identities = 110/383 (28%), Positives = 177/383 (46%), Gaps = 49/383 (12%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDTPN 74
           + T GHVDHGKTTL  AI  + A             D  PEE++RG+TI+  +  +  P+
Sbjct: 3   IATAGHVDHGKTTLLQAITGINA-------------DRLPEEKKRGMTIDLGYAYWPQPD 49

Query: 75  -RHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYIIV 133
            R    +D PGH  ++ NM+ G   +D  +LVVA  DG M QTREH+ + +  G P + V
Sbjct: 50  GRVLGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPQLTV 109

Query: 134 FMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIVELA 193
            + K D VDD  + E+ E  V+  L EY F   D P+       A  G       I EL 
Sbjct: 110 ALTKADRVDDARVSEVRE-TVQATLQEYGFA--DAPLF---VTVATEGRG-----IDELR 158

Query: 194 EALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIKETVK 253
             L   +   + A    F + I+  F+++G G VVTG    G + VGD + + G+ + ++
Sbjct: 159 HHLQ-QLSSRDHASHHRFRLAIDRAFTVKGAGLVVTGTALSGEVNVGDTLWLTGVNKPMR 217

Query: 254 TTCTGVEMFRKLLDEGRAGENVGALLRG-TKREEVERGQVLAKPGSITPHTKFESEVYVL 312
               G+    +  +   AG+ +   + G  ++E++ RG  L       P     SE  ++
Sbjct: 218 V--RGLHAQNQPAEHAHAGQRIALNIAGDAEKEQLNRGDWLLADAPPEP-----SERVIV 270

Query: 313 SKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNVKMVVDLIAPIAMDEG 372
           S      + P  +      +   + +TG + L E        D  ++V D  +P+ + + 
Sbjct: 271 SLQS---NVPLTQWQPLHIHHAASHITGRVSLLE-------NDLAELVFD--SPLWLADN 318

Query: 373 LRFAIRE-GGRTVGAGVVAKIIA 394
            R  +R+   R   AG  A+++A
Sbjct: 319 DRLVLRDISARETLAG--ARVVA 339