Pairwise Alignments

Query, 394 a.a., elongation factor Tu-A from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., selenocysteinyl-tRNA-specific translation factor from Escherichia coli BL21

 Score =  144 bits (363), Expect = 7e-39
 Identities = 102/334 (30%), Positives = 159/334 (47%), Gaps = 37/334 (11%)

Query: 15  VGTIGHVDHGKTTLTAAICTVLAKVYGGKARDFASIDNAPEERERGITINTSHVEYDTPN 74
           + T GHVDHGKTTL  AI  V A             D  PEE++RG+TI+  +  +  P+
Sbjct: 3   IATAGHVDHGKTTLLQAITGVNA-------------DRLPEEKKRGMTIDLGYAYWPQPD 49

Query: 75  -RHYAHVDCPGHADYVKNMITGAAQMDGGILVVAATDGRMPQTREHILLGRQVGIPYIIV 133
            R    +D PGH  ++ NM+ G   +D  +LVVA  DG M QTREH+ + +  G P + V
Sbjct: 50  GRVPGFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLTGNPMLTV 109

Query: 134 FMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALGALNGEAQWEAKIVELA 193
            + K D VD+  + E VE +V+E+L EY F           A   L   A  E + ++  
Sbjct: 110 ALTKADRVDEARVDE-VERQVKEVLREYGF-----------AEAKLFITAATEGRGIDAL 157

Query: 194 EALDTYIPEPERAVDMAFLMPIEDVFSIQGRGTVVTGRIERGILKVGDEVAIVGIKETVK 253
                 +PE E A   +F + I+  F+++G G VVTG    G +KVGD + + G+ + ++
Sbjct: 158 REHLLQLPEREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMR 217

Query: 254 TTCTGVEMFRKLLDEGRAGENVGALLRG-TKREEVERGQVLAKPGSITPHTKFESEVYVL 312
                 +   +  +   AG+ +   + G  ++E++ RG  L       P T+   E+   
Sbjct: 218 VRALHAQ--NQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADVPPEPFTRVIVELQT- 274

Query: 313 SKDEGGRHTPFFKGYRPQFYFRTTDVTGSIELPE 346
                  HTP  +      +   + VTG + L E
Sbjct: 275 -------HTPLTQWQPLHIHHAASHVTGRVSLLE 301