Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., UbiD family decarboxylase, MJ1133 type from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  161 bits (407), Expect = 7e-44
 Identities = 137/465 (29%), Positives = 223/465 (47%), Gaps = 38/465 (8%)

Query: 1   MNFKDLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAK--GPALLFENPLGY-DF 57
           M F DLR FL  L+Q+G+L +I+  ++   ++   ++ T R     PAL F+N  G+ D 
Sbjct: 1   MAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDA 60

Query: 58  PVLTNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVLNM 117
            V  N  G+ +  A+ +G                     P   +K+ I++    ++  N 
Sbjct: 61  RVAMNTIGSWQNHAISLGLP-------------------PNTPVKKQIDEF--IRRWDNF 99

Query: 118 PVKRLRRAP--CQEIVWQGDAVDL-DKIPVMSCWPDDVAPLLTWGLTITRGP----HKKR 170
           PV   RRA     E    GDA++L D +P+      D    L     ++R P    +  +
Sbjct: 100 PVAPERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGK 159

Query: 171 QNLGIYRQQKIARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVT 230
           QN+GIYR +   + K+ ++ +     AL L    E+  GE  P+++  G DP   L   T
Sbjct: 160 QNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEER--GEDLPIAITLGNDPIITLMGAT 217

Query: 231 PVPDTLSEYAFAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTG 290
           P+    SEY  AG LR S   +  +     +VP  +E++LEG I+  +   EGP+G+ TG
Sbjct: 218 PLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTG 277

Query: 291 YYNEVERHHVFTVTHVTMRNKPIYHSTYTGRPPDE-PAVLGVALNEVFVPILQKQFPEI- 348
           +Y+      V  +  V+ R+KPI+ S Y G P  E   ++G A        L+ +FPE+ 
Sbjct: 278 HYSGGRNMTVVRIDKVSYRSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQ 337

Query: 349 ADFYLPPEGCSYRMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWP 408
           A   +   G    +AI++ KK+Y G A+ V L   +      Y K VI+ DE V+  + P
Sbjct: 338 AVNAMYTHGL---LAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLP 394

Query: 409 QVIAAMVNHMSPLRDTLFIEHTPIDSLDFASPVVGLGSKIGLDAT 453
           QV+ A+ + ++P  D + + +  +  LD  S   G+  K+ +DAT
Sbjct: 395 QVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDAT 439



 Score = 39.3 bits (90), Expect = 4e-07
 Identities = 23/98 (23%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 502 LVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIHDWNDVIWAMTTRMDPA 561
           L ++   K+  G A+ +  R +   +G   +K VI+ D+DV+  +   V+WA++++++PA
Sbjct: 348 LAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPA 407

Query: 562 RDSLRIVGQDLICFDATNK---LPDEVEREWGTPIRKD 596
            D +++    ++  D  +    + D++  +  TP+  D
Sbjct: 408 GDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPD 445