Pairwise Alignments

Query, 613 a.a., 4-hydroxy-3-polyprenylbenzoate decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  469 bits (1208), Expect = e-136
 Identities = 237/461 (51%), Positives = 311/461 (67%), Gaps = 9/461 (1%)

Query: 5   DLRDFLDYLEQRGELKRITHPIDPHYEMTEISDRTLRAKGPALLFENPLGYD-----FPV 59
           DLR F+  LE+RG+L+RI  P+   +E+TEI  R L   GPALLFE P+ ++      P+
Sbjct: 29  DLRGFIRLLEERGQLRRIRQPVSLVHEITEIHRRVLADGGPALLFEQPVDHEGKVRKMPL 88

Query: 60  LTNLFGTPERVAMGMGRQQVQELRDVGQWLAYLKEPEPPRGLKELIEKLPVFKQVLNMPV 119
           L NLFGT +R+  G+G +    L  +GQ L  L+EP PP+ + E   KLP+ +  L+M  
Sbjct: 89  LANLFGTRQRIEWGLGLE-TGGLPALGQKLTELREPRPPKSMAEAWSKLPLLRAALSMRQ 147

Query: 120 KRLRRAPCQEIVWQGDAVDLDKIPVMSCWPDDVAPLLTWGLTITRGPHKKRQ-NLGIYRQ 178
           + + RAP QE V   DAVDL ++PV  CWP + APL+TW L ITR P      N+GIYR 
Sbjct: 148 RNVSRAPVQEKVLTRDAVDLARLPVQWCWPGEPAPLITWPLVITRSPDDPDDINVGIYRM 207

Query: 179 QKIARNKVIMRWLAHRGGALDLRDWMEKHPGEPFPVSVAFGADPATILGAVTPVPDTLSE 238
           Q +  ++VIMRWLAHRGGA   R W  +  G   PV+VA GADPATIL AV P+PD +SE
Sbjct: 208 QVLGPDRVIMRWLAHRGGAHHHRLWQAR--GLDMPVTVAIGADPATILAAVMPLPDHISE 265

Query: 239 YAFAGLLRGSRTEVVKSISNDLEVPASAEIVLEGYIDPNEFADEGPYGDHTGYYNEVERH 298
             F+GLLRG+++ + K+++  + VPA+AEIVLEG +   E A EGPYGDHTGYYN VE  
Sbjct: 266 LGFSGLLRGAKSRIAKALTVPMPVPANAEIVLEGTVSATETAMEGPYGDHTGYYNSVEAF 325

Query: 299 HVFTVTHVTMRNKPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIADFYLPPEGC 358
            V T++ +TMR  PIY STYTGRPPDEP+VLG A+ E+F+P++++QF EI D ++PPE C
Sbjct: 326 PVMTLSAITMRRDPIYLSTYTGRPPDEPSVLGEAMLEIFLPLVKRQFAEIVDLWMPPEAC 385

Query: 359 SYRMAIVTLKKQYPGHAKRVMLGVWSFLRQFMYTKFVIVCDEQVNARDWPQVIAAMVNHM 418
           SYR+ + ++ K+YPG AKRVM+G+WS L QF Y K +I+ D  ++ R W  V+ A+    
Sbjct: 386 SYRVMVASIDKRYPGQAKRVMMGLWSMLPQFSYVKLIILVDPDIDVRSWTDVVWALSTRF 445

Query: 419 SPLRDTLFIEHTPIDSLDFASPVVGLGSKIGLDATAKWPAE 459
              RDT  I  TPID LDFASP  GLG K+GLDAT K P E
Sbjct: 446 DASRDTTIINDTPIDYLDFASPKAGLGGKMGLDATRKLPPE 486



 Score = 92.0 bits (227), Expect = 5e-23
 Identities = 48/142 (33%), Positives = 83/142 (58%), Gaps = 16/142 (11%)

Query: 487 ADVLDVALP-EAANDKLVLLLINKQEAGQAQQLLQRVVDKLNGDSPLKFVILCDDDVNIH 545
           A+++D+ +P EA + ++++  I+K+  GQA++++  +   L   S +K +IL D D+++ 
Sbjct: 373 AEIVDLWMPPEACSYRVMVASIDKRYPGQAKRVMMGLWSMLPQFSYVKLIILVDPDIDVR 432

Query: 546 DWNDVIWAMTTRMDPARDSLRIVGQDL---------------ICFDATNKLPDEVEREWG 590
            W DV+WA++TR D +RD+  I    +               +  DAT KLP E EREWG
Sbjct: 433 SWTDVVWALSTRFDASRDTTIINDTPIDYLDFASPKAGLGGKMGLDATRKLPPETEREWG 492

Query: 591 TPIRKDPKLVAKIDSLWDELGI 612
             +   P +VAK+D +W +LG+
Sbjct: 493 RVLSMTPDVVAKVDLVWRDLGL 514