Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., transcription termination factor Rho from Rhodanobacter sp000427505 FW510-R12

 Score =  624 bits (1610), Expect = 0.0
 Identities = 311/419 (74%), Positives = 366/419 (87%), Gaps = 1/419 (0%)

Query: 1   MNLTELKNTPVSDLVKLGESLGL-ENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQ 59
           +NLTELK      L++  ESLG+ E +AR RKQD+IF +LKAHA+SG  I+ +GVLEILQ
Sbjct: 176 INLTELKRMKAPQLLEFAESLGVHEGVARARKQDVIFNVLKAHARSGGGIWAEGVLEILQ 235

Query: 60  DGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKEGERYFALLKVNTV 119
           DGFGFLRSAD SYLAGPDDIYVSPSQIRRFNLRTGD I G++R PKEGERYFA+L+V+ +
Sbjct: 236 DGFGFLRSADESYLAGPDDIYVSPSQIRRFNLRTGDYITGRVRHPKEGERYFAMLRVDDI 295

Query: 120 NDDRPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLAAPIGKGQRGLIVAP 179
           N D P+ ++NK+LFENLTPL   +   +ERGNGS+EDIT R+LDL APIGKGQRGLIV+ 
Sbjct: 296 NGDPPEASKNKMLFENLTPLFPRKAYKLERGNGSSEDITGRILDLIAPIGKGQRGLIVSQ 355

Query: 180 PKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRH 239
           PK+GKTM+LQN+AQ+I  NHPE  L++LLIDERPEEVTE+ R V+ EV++STFDEPA RH
Sbjct: 356 PKSGKTMMLQNVAQAITYNHPEAHLIMLLIDERPEEVTEIARTVRAEVISSTFDEPAVRH 415

Query: 240 VQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKR 299
           VQVAEMVIE+AKRLVEHK+DVVILLDSITRLARAYNTVVP+SGKVLTGGVDANAL RPKR
Sbjct: 416 VQVAEMVIERAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKR 475

Query: 300 FFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAID 359
           FFGAARNVEEGGSLTIIATAL +TGSKMDEVIYEEFKGTGNME+HL+R+I+EKRV+PAID
Sbjct: 476 FFGAARNVEEGGSLTIIATALTETGSKMDEVIYEEFKGTGNMEVHLSRRISEKRVYPAID 535

Query: 360 FNRSGTRREELLTKTDELQKMWILRKIVHPMGETDAMEFLIDKLAMTKTNDEFFDAMRR 418
            NRSGTRRE+LL   D L K+WILRK++HPM E  AMEF++DK+  TK+NDEFF++M+R
Sbjct: 536 INRSGTRREDLLIDPDMLAKIWILRKLLHPMDELAAMEFMLDKMKNTKSNDEFFNSMKR 594