Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., putative secretion system apparatus ATP synthase SsaN from Xanthobacter sp. DMC5

 Score = 69.7 bits (169), Expect = 2e-16
 Identities = 68/238 (28%), Positives = 110/238 (46%), Gaps = 14/238 (5%)

Query: 138 PLHANERMVMERGNGSTEDITA-RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIA 196
           PL +     M RG      +T  R +D+  PI +GQR  I A    GK+ LL   A+S  
Sbjct: 138 PLDSEPPPAMARGRVHRPLVTGVRAVDIFTPICEGQRIGIFAGSGVGKSTLLSMFARSAG 197

Query: 197 SNHPECVLMVLLIDERPEEVTEMQR------LVKGEVVASTFDEPASRHVQVAEMVIEKA 250
            +     ++V L+ ER  EV E           +  V+ ST D+         +  +  A
Sbjct: 198 FD----TVVVALVGERGREVREFLEGPLAASRDRAVVIVSTSDQSPMMRRLAPQAALAVA 253

Query: 251 KRLVEHKKDVVILLDSITRLARAYNTVVPASGK--VLTGGVDANALHRPKRFFGAARNVE 308
           +      + V++++DS+TR A A   V  A+G+  V  G   +     PK    A   +E
Sbjct: 254 EYFRNAGESVLLIVDSVTRYAHAARDVALAAGEPAVARGYAPSVFSTLPKLLERAGPGME 313

Query: 309 EGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTR 366
             G++T I + LVD G   ++ + +  +GT +  + L+R IA++  FPAI+   S +R
Sbjct: 314 GEGAITGIFSVLVD-GDDHNDPVADAIRGTLDGHIVLDRAIADQGRFPAINLLGSISR 370