Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., ATP synthase from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 20/241 (8%)

Query: 156 DITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEE 215
           D+  R ++    +G+GQR  + A    GK++LL  + +   ++    +++V LI ER  E
Sbjct: 153 DVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAD----IIVVGLIGERGRE 208

Query: 216 VTEM-------QRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSIT 268
           V E        + L +  VVAS  D+     ++ A      A+   +  K+V++L+DS+T
Sbjct: 209 VKEFIEHSLGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 268

Query: 269 RLARAYNTVVPASGKV-LTGGVDANALHRPKRFFGAARNVEEGG-SLTIIATALVDTGSK 326
           R A+A   +  A G+   T G   +   +  +    A N E GG S+T   T L + G  
Sbjct: 269 RFAQAQREIALAIGEPPATKGYPPSVFAKLPKLVERAGNAEAGGGSITAFYTVLSE-GDD 327

Query: 327 MDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTR------REELLTKTDELQKM 380
             + I +  +G  +  + L+R++AE+  +PAID   S +R        E + +  + +++
Sbjct: 328 QQDPIADSARGVLDGHIVLSRRLAEEGHYPAIDIEASISRVMPAVVTPEHMIRAQQFKQL 387

Query: 381 W 381
           W
Sbjct: 388 W 388