Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Flagellum-specific ATP synthase FliI from Variovorax sp. SCN45

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSI----ASNHPECVLMVLLIDERPEE 215
           R +D    +G+GQR  I A    GK+ LL  +A+ +     ++    + ++ LI ER  E
Sbjct: 159 RSIDALLTLGQGQRVGIFAGSGVGKSTLLGLLARHVKTQAGADGQGSINVIALIGERGRE 218

Query: 216 VTE-------MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSIT 268
           V E       +  L +  VV +T D+PA   ++ A   +  A+   +   +V++ +DS+T
Sbjct: 219 VREFIEKQLGVDGLARSVVVVATSDQPALARLRAAYAALAIAEHFRDGGSNVLLTMDSVT 278

Query: 269 RLARAYNTVVPASGKVLTG-GVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSKM 327
           R A A   V  ++G+  T  G   +                 GGS+T + T LV+ G  +
Sbjct: 279 RFAMARREVGLSAGEPPTARGYTPSVFAELPELCERCGTAPGGGSITALLTVLVE-GDDL 337

Query: 328 DEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDE 376
           +E + +  +   +  + L+R++A +  +PAID  +S +R    L   DE
Sbjct: 338 NEPVSDALRAILDGHIVLSRQLAHRGHYPAIDVLKSVSRLMPELADDDE 386