Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., Flagellum-specific ATP synthase FliI from Sphingobium sp. HT1-2

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 14/253 (5%)

Query: 123 RPDNARNKILFENLTPLHANERMVMERGNGSTE-DITARVLDLAAPIGKGQRGLIVAPPK 181
           +P + +  I+   + PL+  +  V++RG  +   D+  R ++     G+GQR  I+A   
Sbjct: 114 QPLDRKGPIIAGGVWPLNGVKGNVLDRGRVTEPFDLGVRAVNALLTAGRGQRIAIIAGSG 173

Query: 182 AGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEM------QRLVKGEVVASTFDEP 235
            GK++L+    Q IA    + +++  LI ER  EV++         + K  VVA   D P
Sbjct: 174 VGKSVLM---GQMIAGAEAD-IVVTGLIGERGREVSDFLETKLKHAMHKSIVVAVPADHP 229

Query: 236 ASRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGK--VLTGGVDANA 293
               ++ A      A+      K V++L+DS+TR A A   +  A G+   + G   +  
Sbjct: 230 PVLRLRAAARATAIAEYFRARGKKVLLLIDSLTRCAHAQREIGLALGEPPAMKGYPPSAL 289

Query: 294 LHRPKRFFGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKR 353
              P+    A  +   GGS+T + T L D G   D+ I +  +   +    L+R ++E+ 
Sbjct: 290 ALIPRLVERAGVDARTGGSITALYTVLAD-GDDTDDPIVDAARAIVDGHFVLSRSLSEQA 348

Query: 354 VFPAIDFNRSGTR 366
           +FPAID  +S +R
Sbjct: 349 IFPAIDIGKSLSR 361