Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., flagellum-specific ATP synthase from Pseudomonas putida KT2440

 Score = 72.0 bits (175), Expect = 3e-17
 Identities = 65/233 (27%), Positives = 110/233 (47%), Gaps = 14/233 (6%)

Query: 156 DITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEE 215
           D+  R ++    +G+GQR  + A    GK++LL  + +   +     +++V LI ER  E
Sbjct: 159 DVGIRSINGLLTVGRGQRLGLFAGTGVGKSVLLGMMTRFTEAE----IIVVGLIGERGRE 214

Query: 216 VTEMQRLVKGE-------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSIT 268
           V E    + GE       VVAS  D+     ++ A      A+   +  K+V++L+DS+T
Sbjct: 215 VKEFIEHILGEEGLKRSVVVASPADDAPLMRLRAAMYCTRIAEYFRDKGKNVLLLMDSLT 274

Query: 269 RLARAYNTVVPASGK-VLTGGVDANALHR-PKRFFGAARNVEEGGSLTIIATALVDTGSK 326
           R A+A   +  A G+   T G   +   + PK    A      GGS+T   T L + G  
Sbjct: 275 RFAQAQREIALAIGEPPATRGYPPSVFAKLPKLVERAGNGEPGGGSITAFYTVLSE-GDD 333

Query: 327 MDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQK 379
             + I +  +G  +    L+R++AE+  +PAID   S +R    +   D L++
Sbjct: 334 QQDPIADSARGVLDGHFVLSRRLAEEGHYPAIDIEASISRVMPQVVDADHLRQ 386