Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 453 a.a., flagellum-specific ATP synthase FliI from Erwinia tracheiphila SCR3

 Score = 65.1 bits (157), Expect = 4e-15
 Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 14/220 (6%)

Query: 156 DITARVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEE 215
           D   R ++    +G+GQR  + A    GK++LL  +A+   ++    V++V LI ER  E
Sbjct: 159 DTGVRAINALLTVGRGQRMGLFAGSGVGKSVLLGMMARYTKAD----VIVVGLIGERGRE 214

Query: 216 VTEMQRLVKGE-------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVVILLDSIT 268
           V +    + G        V+A+  D      +Q A      A+   +  + V++++DS+T
Sbjct: 215 VKDFIENILGSEGRARAVVIAAPADVSPLLRMQGAAYATRIAEDFRDRGQHVLLIMDSLT 274

Query: 269 RLARAYNTVVPASGK-VLTGGVDANALHR-PKRFFGAARNVEEGGSLTIIATALVDTGSK 326
           R A A   +  A G+   T G   +   R P     A   ++ GGS+T   T L + G  
Sbjct: 275 RYAMAQREIALAIGEPPATKGYPPSVFARLPALVERAGNGIDGGGSITAFYTVLTE-GDD 333

Query: 327 MDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTR 366
             + I +  +   +  + L+R++AE   +PAID   S +R
Sbjct: 334 QQDPIADSARAILDGHIVLSRRLAESGHYPAIDIEASISR 373