Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 473 a.a., flagellum-specific ATP synthase from Agrobacterium fabrum C58

 Score = 72.0 bits (175), Expect = 4e-17
 Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 23/247 (9%)

Query: 160 RVLDLAAPIGKGQRGLIVAPPKAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEM 219
           R +D+ +P+  GQR  I A    GK+ LL  +A++ A +     +++ L+ ER  EV E 
Sbjct: 169 RAIDIFSPLCLGQRLGIFAGSGVGKSTLLSMLAKADAFDK----VVIALVGERGREVREF 224

Query: 220 QRLVKGE-------VVASTFDEPASRHVQVAEMVIEKAKRLVEHKKD----VVILLDSIT 268
                G+       VVA++ + P  R     +M    A  + EH +D    V++++DS+T
Sbjct: 225 IEDTMGDNMSKSVAVVATSDESPMLR-----KMAPLSAVTIAEHFRDQGDNVLLIIDSVT 279

Query: 269 RLARAYNTVVPASGK--VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALVDTGSK 326
           R A A   V  ASG+  V  G   +     P+    A    E  G++T I + LVD G  
Sbjct: 280 RFAHAIREVAVASGEPPVARGYPASVFTELPRLLERAGPGAEGTGTITAIVSILVD-GDN 338

Query: 327 MDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDFNRSGTRREELLTKTDELQKMWILRKI 386
            ++ I +  +G  +  + L+R +AE+  +P I+   S +R  +     D+ + +  L+ +
Sbjct: 339 HNDPIADSTRGILDGHIVLDRSLAEEGRYPPINPLASISRLAKKAWTPDQEKLVSRLKAL 398

Query: 387 VHPMGET 393
           VH   ET
Sbjct: 399 VHRFEET 405