Pairwise Alignments

Query, 419 a.a., transcription termination factor Rho from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., Transcription termination factor Rho from Acinetobacter radioresistens SK82

 Score =  653 bits (1684), Expect = 0.0
 Identities = 324/419 (77%), Positives = 373/419 (89%)

Query: 1   MNLTELKNTPVSDLVKLGESLGLENLARLRKQDIIFAILKAHAKSGEDIFGDGVLEILQD 60
           MNLTELK  P+ +L+K+ E +GLE +AR RKQDIIFAILK HA +GE+IFGDGVLEIL D
Sbjct: 1   MNLTELKKKPIGELIKIAEFMGLEGMARNRKQDIIFAILKRHAMNGEEIFGDGVLEILSD 60

Query: 61  GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKEGERYFALLKVNTVN 120
           GFGFLRSA  SYLAGPDDIYVSPSQIRRFNLRTGD+I G IRPPKEGERYFALLKVN +N
Sbjct: 61  GFGFLRSAAGSYLAGPDDIYVSPSQIRRFNLRTGDTITGTIRPPKEGERYFALLKVNQIN 120

Query: 121 DDRPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLAAPIGKGQRGLIVAPP 180
            D P+N+RNKILFENLTPL   E++VME GNG+TED+TARV+DL APIGKGQR +IVAPP
Sbjct: 121 YDTPENSRNKILFENLTPLFPTEQLVMELGNGTTEDLTARVVDLVAPIGKGQRSIIVAPP 180

Query: 181 KAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV 240
           KAGKTMLLQNIAQSI  N+PE  L+VLLIDERPEEVTEM+R V+GEVVASTFDE  +RHV
Sbjct: 181 KAGKTMLLQNIAQSIVRNNPEVFLIVLLIDERPEEVTEMERTVRGEVVASTFDESPARHV 240

Query: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF 300
           QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTV+P+SGKVLTGG+DA+AL RPKRF
Sbjct: 241 QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVIPSSGKVLTGGLDAHALERPKRF 300

Query: 301 FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF 360
           FGAARN+EEGGSLTII+TAL++TGSKMD+VIYEEFKGTGN E+ L+R+IAEKRVFPA++ 
Sbjct: 301 FGAARNIEEGGSLTIISTALIETGSKMDDVIYEEFKGTGNQEITLDRRIAEKRVFPAMNI 360

Query: 361 NRSGTRREELLTKTDELQKMWILRKIVHPMGETDAMEFLIDKLAMTKTNDEFFDAMRRQ 419
            +SGTRREE L   + L+K+WILRK++HPM E  AMEFL+D++  TKTND+FFD M+R+
Sbjct: 361 KKSGTRREERLMSEENLRKVWILRKLLHPMDELAAMEFLLDRMKETKTNDDFFDQMKRK 419