Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 614 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  262 bits (669), Expect = 3e-74
 Identities = 147/363 (40%), Positives = 208/363 (57%), Gaps = 10/363 (2%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F    L P V+  L   G+   +PIQA  +P LL G+D+ GQAQTGTGKT AF     + 
Sbjct: 15  FGALALHPDVLRVLADVGYESPSPIQAATIPPLLEGRDVLGQAQTGTGKTAAFALPILSR 74

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLAST-GLKAALAYGGESYDKQLA 129
           +   P        +P+A+++APTRELAIQ+    +   A   G +    YGG+SY  QL 
Sbjct: 75  IERKPG-------KPQALVLAPTRELAIQVAEAFQTYAAHLPGFQVLPIYGGQSYGPQLH 127

Query: 130 KLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
            L+ GV +++GT GR+ID   +   +L+ ++ +VLDEAD M  +GFI D+  + +  P  
Sbjct: 128 SLKRGVHVVVGTPGRVIDHLDKGTLDLSELKFLVLDEADEMLRMGFIDDVEKVLQATPP- 186

Query: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQT 249
             R   LFSAT+   ++++A  H+  P  V ++    T   I +  ++ S  HK+  L  
Sbjct: 187 -GRQVALFSATMPAPIRKIAQRHLKEPVEVTIKAATTTAANIHQRYWFVSGMHKLDALTR 245

Query: 250 LIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDI 309
           ++E E  D  IIFA TK   E++   L A       + GD+ Q +RER+++Q   G +DI
Sbjct: 246 ILEAEPFDAMIIFARTKQATEELAEKLQARGLAAAAINGDIAQAQRERVIQQLKDGKLDI 305

Query: 310 LVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLP 369
           LVATDVAARGL + +++HV NYD+P D E YVHRIGRTGRAG SG +I F        L 
Sbjct: 306 LVATDVAARGLDVERISHVLNYDIPYDTESYVHRIGRTGRAGRSGEAILFVSPRERGMLH 365

Query: 370 AIE 372
           AIE
Sbjct: 366 AIE 368