Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 583 a.a., DEAD/DEAH box helicase from Rhodanobacter sp000427505 FW510-R12

 Score =  441 bits (1135), Expect = e-128
 Identities = 217/394 (55%), Positives = 288/394 (73%)

Query: 1   MKKTHITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKT 60
           M +T +T+  FA+F L P +  GL+  GF  CTPIQ + LP  L+G+D+AGQAQTGTGKT
Sbjct: 1   MSQTILTDTFFANFDLHPLLQQGLDDSGFTRCTPIQEMTLPPALAGRDVAGQAQTGTGKT 60

Query: 61  LAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYG 120
            AFL A  N LLTTPA   R ++ PRA+I+APTRELAIQI  DA  +   TGLK AL YG
Sbjct: 61  CAFLVALMNRLLTTPAVAERKDSDPRALIIAPTRELAIQIDKDARNIGRHTGLKTALIYG 120

Query: 121 GESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIR 180
           G  YDKQ  +L+ G DI+I T GR++D++KQ VF+LN ++ +V+DEADRMFDLGFIKD+R
Sbjct: 121 GVDYDKQRQQLKDGCDIIIATPGRLLDYHKQGVFSLNGVEVMVIDEADRMFDLGFIKDVR 180

Query: 181 FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSN 240
           F+FR++P  + R  +LFSATLS+RV ELA+EHM+  E +VVE +  T  ++++ +++P+ 
Sbjct: 181 FIFRKLPPREQRQVLLFSATLSHRVLELAYEHMHEAEKLVVESDHVTADKVRQVVYFPAK 240

Query: 241 EHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILE 300
           E KM LL  LI+   P R+IIF NTK   E++   +     RVG ++GDVPQ KR+++L+
Sbjct: 241 EEKMPLLLNLIDRHQPTRSIIFVNTKAAAERVTERVKRHGCRVGAISGDVPQLKRQKLLQ 300

Query: 301 QFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFA 360
           +F +G +DILVATDVAARGLHIP V+HVFNYDLP + EDYVHRIGRT R GA G +ISFA
Sbjct: 301 RFQEGQLDILVATDVAARGLHIPHVSHVFNYDLPHEAEDYVHRIGRTARLGAEGDAISFA 360

Query: 361 CEEYAINLPAIESYIEHAIPTSDYDPSALLTDLP 394
           C+ YA++LP IE+YI  +IP +  +P  L+   P
Sbjct: 361 CDLYAMSLPDIETYIGQSIPVAAMEPELLVMPRP 394