Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 570 a.a., ATP-dependent RNA helicase RhlE from Xanthobacter sp. DMC5

 Score =  269 bits (688), Expect = 1e-76
 Identities = 157/427 (36%), Positives = 235/427 (55%), Gaps = 8/427 (1%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F+  GL   ++  L +   V  TPIQA A+P +L+G+D+ G AQTGTGKT AF     + 
Sbjct: 28  FSSLGLAEPIVRALTEANHVTPTPIQAEAIPQVLAGRDLIGIAQTGTGKTAAFALPILDR 87

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           L+  P          RA++++PTREL+ QI ++ E       +   LA GG    +Q+  
Sbjct: 88  LVRHPRRPDPKSV--RALVLSPTRELSGQIVDNFEKFGRHARISVTLAIGGVPMGRQIRA 145

Query: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPK 190
           L  GVD+L+ T GR++D  +     L+ ++ +VLDEAD+M D+GF+  IR + RR+P   
Sbjct: 146 LARGVDVLVATPGRLMDLVENHAVKLDQVEVLVLDEADQMLDMGFVHAIRAIVRRLPHK- 204

Query: 191 DRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL 250
            R ++ FSAT+   + ELA   +++P  V V P  KT  R+++ + +    +K  LL  +
Sbjct: 205 -RHSLFFSATMPPAIAELAGGMLHDPVRVAVTPVAKTADRVEQRVIHVDKPNKGQLLAEV 263

Query: 251 IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDIL 310
           +  E  DRA++FA TKH  +++   LA        + G+  Q +R+R+L  F +G +  L
Sbjct: 264 LSTEEIDRALVFARTKHGADKVVRVLAKCGIAAEAIHGNKSQNQRDRVLLAFREGKIRTL 323

Query: 311 VATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPA 370
           +ATD+AARG+ +  V+HV NYDLP+  E YVHRIGRT RAG  G +ISF   E    L +
Sbjct: 324 IATDIAARGIDVTGVSHVINYDLPNVPESYVHRIGRTARAGREGIAISFCDHEERAYLKS 383

Query: 371 IESYIEHAIPTSDYDPSALLTDLP--APLSLRSSPQQRRTNTAGSRNSNNGGNRKPQQRR 428
           IE  I+  IP +D   + +   +P   P+ L    +    N          G R PQ  R
Sbjct: 384 IERLIKLQIPATDRRGAGMRFAIPDAPPIELEERDETAERNDFIGGRGGRPGQRGPQ--R 441

Query: 429 PRAPRPK 435
            R PRP+
Sbjct: 442 SRGPRPE 448