Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score =  257 bits (657), Expect = 5e-73
 Identities = 152/421 (36%), Positives = 228/421 (54%), Gaps = 12/421 (2%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F   GL   ++  +E+KG+   +PIQ  A+P +L+G+D+   AQTGTGKT  F       
Sbjct: 3   FTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILEL 62

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           L   P        Q RA+I+ PTRELA QI ++         LK+A+ +GG   + Q+ +
Sbjct: 63  LAKGPKVRAN---QVRALILTPTRELAAQIQDNVMLYGRHLPLKSAVVFGGVKINPQMQR 119

Query: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPK 190
           +  G DIL+ T GR++D Y Q     + ++ +VLDEADRM D+GFI+DI  + + +PE  
Sbjct: 120 MCKGADILVATPGRLMDLYNQNAVKFDQLEILVLDEADRMLDMGFIRDIHKILKLLPEK- 178

Query: 191 DRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL 250
            R N+LFSAT S  ++ELA   +NNP  + V P   T   +++ ++    + K  +L  L
Sbjct: 179 -RQNLLFSATFSTEIRELAKGLVNNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKL 237

Query: 251 IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDIL 310
           ++E    + ++F  TKH   ++  +L         + G+  Q  R R L  F  G+V IL
Sbjct: 238 VKEGNWQQVLVFMRTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRIL 297

Query: 311 VATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPA 370
           VATD+AARG+ IPQ+  V N++LP   EDYVHRIGRTGRAG  G +IS      A  L A
Sbjct: 298 VATDIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAIEAPELFA 357

Query: 371 IESYIEHAIP---TSDYDPSALLTDL---PAPLSLRSSPQQRRTNTAGSRNSNNGGNRKP 424
           IE   +  +P    + ++P+  L +      PL  +   + ++   AG  N  +    KP
Sbjct: 358 IERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKKVEGAG-ENKGSVAENKP 416

Query: 425 Q 425
           +
Sbjct: 417 K 417