Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., DEAD/DEAH box helicase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  264 bits (674), Expect = 5e-75
 Identities = 160/452 (35%), Positives = 240/452 (53%), Gaps = 27/452 (5%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F +  L   ++  L+ +G+   TPIQA ++P++L  +D+ G AQTGTGKT AF       
Sbjct: 3   FENLNLIEPILKALKTEGYTTPTPIQAKSIPLILEKKDLLGCAQTGTGKTAAFSIPILQL 62

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           L     AE +   + +A+I+ PTRELA+QI +  E     TGLK  + +GG    KQ   
Sbjct: 63  LHEKQGAE-KGPRKIKALILTPTRELALQIGDSMEAYGKHTGLKHTVIFGGVPQKKQTDA 121

Query: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPK 190
           L++GVDILI T GR++D   Q+  +L HI+  VLDEADRM D+GF+ D++ + + +PE K
Sbjct: 122 LRAGVDILIATPGRLLDLMAQKYVHLQHIELFVLDEADRMLDMGFVNDVKKVLKVLPEQK 181

Query: 191 DRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL 250
             L   FSAT++  + +L+   + NP  V V P   T + IQ+ ++Y     K  LL  L
Sbjct: 182 QSL--FFSATMAPEIMKLSDTILVNPAKVEVTPVSSTANTIQQSVYYVKGPDKRKLLLHL 239

Query: 251 IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDIL 310
           +++E  +  ++F  TK   +++   +A        + G+  Q  R R L+ F      +L
Sbjct: 240 LKDEEMESVLVFTRTKRGADRVAKDIAKAGVTAEAIHGNKAQNARVRALDNFKSRRTRVL 299

Query: 311 VATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPA 370
           VATD+AARG+ +  ++HV NY+LP++ E YVHRIGRTGRAGASG ++SF   +    L +
Sbjct: 300 VATDIAARGIDVDDLSHVVNYELPNEPETYVHRIGRTGRAGASGIALSFCGADEVPYLAS 359

Query: 371 IESYIEHAIPTSDYDPSALLTDLPAPLSLRSSPQQRR-----------------TNTAGS 413
           I+  I   +P  D  P  L     A  +     Q+++                   +AGS
Sbjct: 360 IQKLISKNVPVIDNHPYPLTAKDFAEAASTVKEQKKQGGRGGRSRWGNKPSGEGGGSAGS 419

Query: 414 RNSN-------NGGNRKPQQRRPRAPRPKKEA 438
            N N       NGG  +    R R+  PK  A
Sbjct: 420 ANRNRPAGGPRNGGGNRSNGNRSRSGAPKTNA 451