Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., ATP-dependent RNA helicase RhlE from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  276 bits (706), Expect = 1e-78
 Identities = 159/422 (37%), Positives = 232/422 (54%), Gaps = 12/422 (2%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F   GL P ++  + ++G+   TPIQ  A+P +L G+D+   AQTGTGKT  F      H
Sbjct: 3   FDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62

Query: 71  LLT-TPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLA 129
           L+T  P A+GR     RA+I+ PTRELA QI  +         +++ + +GG S + Q+ 
Sbjct: 63  LITHQPHAKGRRPV--RALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM 120

Query: 130 KLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
           KL+ GVD+L+ T GR++D   Q    L+ I+ +VLDEADRM D+GFI DIR +  ++P  
Sbjct: 121 KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK 180

Query: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQT 249
             R N+LFSAT S  ++ LA + + NP  + V        ++ + + +   + K  LL  
Sbjct: 181 --RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQ 238

Query: 250 LIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDI 309
           +I +    + ++F  TKH    +   L  D  R   + G+  Q  R R L  F  GD+ +
Sbjct: 239 MIGQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRV 298

Query: 310 LVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLP 369
           LVATD+AARGL I ++ HV NY+LP+  EDYVHRIGRTGRA A+G ++S  C +    L 
Sbjct: 299 LVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLR 358

Query: 370 AIESYIEHAIP---TSDYDPSALLTDLPAPLSLRSSPQQRRTNTAGSRNSNNGGNRKPQQ 426
            IE  ++  IP   T  Y+P   +   P    +++  QQR       R  N GG  + QQ
Sbjct: 359 DIEKLLKKEIPRITTPGYEPDPSIKAEP----IQNGRQQRGGGGGRGRGQNQGGAGRSQQ 414

Query: 427 RR 428
            R
Sbjct: 415 PR 416