Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 421 a.a., ATP-dependent RNA helicase RhlB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  639 bits (1649), Expect = 0.0
 Identities = 318/421 (75%), Positives = 352/421 (83%), Gaps = 1/421 (0%)

Query: 1   MKKTHITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKT 60
           M KTH+TE KF+DF L PQV++ LEKKGF  CTPIQALALP+ L+G+D+AGQAQTGTGKT
Sbjct: 1   MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60

Query: 61  LAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYG 120
           +AFLT+TF++LL+ PA + R   QPRA+IMAPTRELA+QI  DAEPL  +TGLK  LAYG
Sbjct: 61  MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG 120

Query: 121 GESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIR 180
           G+ YDKQL  L+SGVDILIGTTGR+ID+ KQ   NL  IQ VVLDEADRM+DLGFIKDIR
Sbjct: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180

Query: 181 FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSN 240
           +LFRRMP    RLNMLFSATLSYRV+ELAFE MNN E+V VEPEQKTGHRI+EELFYPSN
Sbjct: 181 WLFRRMPPAAQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240

Query: 241 EHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILE 300
           E KM LLQTLIEEEWPDRAIIFANTKHRCE IW HLAAD HRVGLLTGDV QKKR RIL+
Sbjct: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD 300

Query: 301 QFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFA 360
           +FT+GD+DILVATDVAARGLHIP VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS A
Sbjct: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360

Query: 361 CEEYAINLPAIESYIEHAIPTSDYDPSALLTDLPAPLSL-RSSPQQRRTNTAGSRNSNNG 419
           CEEYA+NLPAIESYI H+IP S Y+P AL+ DLP PL L RS P          RN    
Sbjct: 361 CEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLTRSRPGNGPRRAGAPRNRRRS 420

Query: 420 G 420
           G
Sbjct: 421 G 421