Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 422 a.a., Superfamily II DNA and RNA helicases from Enterobacter asburiae PDN3

 Score =  631 bits (1627), Expect = 0.0
 Identities = 317/422 (75%), Positives = 352/422 (83%), Gaps = 3/422 (0%)

Query: 1   MKKTHITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKT 60
           M KTH+TE KF+DF L P+VI+ LE KGF  CTPIQALALP+ L+G+D+AGQAQTGTGKT
Sbjct: 1   MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT 60

Query: 61  LAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYG 120
           +AFLT+TF++LL+ PA   R   QPRA+IMAPTRELA+QI  DAEPL  STGLK  LAYG
Sbjct: 61  MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG 120

Query: 121 GESYDKQLAKLQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIR 180
           G+ YDKQL  L+SGVDILIGTTGR+ID+ KQ   NL  IQ VVLDEADRM+DLGFIKDIR
Sbjct: 121 GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR 180

Query: 181 FLFRRMPEPKDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSN 240
           +LFRRMP    RLNMLFSATLSYRV+ELAFE MNN E+V VEPEQKTGHRI+EELFYPSN
Sbjct: 181 WLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN 240

Query: 241 EHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILE 300
           E KM LLQTLIEEEWPDRAIIFANTKHRCE IW HLAAD HRVGLLTGDV QKKR RILE
Sbjct: 241 EEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE 300

Query: 301 QFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFA 360
           +FT+GD+DILVATDVAARGLHIP VTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS A
Sbjct: 301 EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA 360

Query: 361 CEEYAINLPAIESYIEHAIPTSDYDPSALLTDLPAPLSL---RSSPQQRRTNTAGSRNSN 417
           CEEYA+NLPAIE+YI H+IP S Y+P ALL++LP P  L   RS    RR+  A      
Sbjct: 361 CEEYALNLPAIETYIGHSIPQSKYNPEALLSELPPPKRLTRPRSGNGPRRSGGAPRNRRR 420

Query: 418 NG 419
           +G
Sbjct: 421 SG 422