Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., ATP-dependent RNA helicase RhlE from Dickeya dianthicola ME23

 Score =  270 bits (690), Expect = 7e-77
 Identities = 161/430 (37%), Positives = 235/430 (54%), Gaps = 20/430 (4%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F   GL   ++  +E++G+   TP+Q  A+PV+L G+D+   AQTGTGKT  F T     
Sbjct: 3   FESLGLSADILRAVEEQGYREPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGF-TLPLLQ 61

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           LL+   ++ +     RA+I+ PTRELA QI  +         L++ + +GG S + Q+ K
Sbjct: 62  LLSQRPSQAKGRRPVRALILTPTRELAAQIGENVLAYSQYLRLRSLVVFGGVSINPQMMK 121

Query: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPK 190
           L+SGVDILI T GR++D   Q   +L+ ++ +VLDEADRM D+GFI DIR +  ++P   
Sbjct: 122 LRSGVDILIATPGRLLDLEHQNAVDLSQVEILVLDEADRMLDMGFIHDIRRVLAKLPSK- 180

Query: 191 DRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL 250
            R N+LFSAT S  ++ELA + + NP  V V         + + + Y   + K  LL  L
Sbjct: 181 -RQNLLFSATFSDEIKELAGKLLTNPASVEVVRRNTPSELVTQHVHYVDKKRKRELLSHL 239

Query: 251 IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDIL 310
           I +    + ++F  TKH    +   L  D      + G+  Q  R R L  F  GD+ +L
Sbjct: 240 IGKHDWRQVLVFTRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALANFKDGDIRVL 299

Query: 311 VATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPA 370
           VATD+AARGL I Q+ HV NY+LP+  EDYVHRIGRTGRA ++G ++S  C +    L  
Sbjct: 300 VATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAESTGEALSLVCVDEHKLLRD 359

Query: 371 IESYIEHAIPTSD---YDPSALLTDLPAPLSLRSSPQQRRTNTAGSRNSNNGGNR---KP 424
           IE  ++  IP  +   Y+P           ++++ P Q      G R  + G  R   +P
Sbjct: 360 IERLLKREIPRMEIAGYEPDP---------TIKAEPIQ--NGRQGGRGGHGGAPRQGDRP 408

Query: 425 QQRRPRAPRP 434
           Q  RP+  RP
Sbjct: 409 QGGRPQGDRP 418