Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., ATP-dependent RNA helicase RhlE from Alteromonas macleodii MIT1002

 Score =  260 bits (664), Expect = 8e-74
 Identities = 152/426 (35%), Positives = 224/426 (52%), Gaps = 15/426 (3%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F   GL   ++  +EK+GF   +PIQ  A+P +L G+D+   AQTGTGKT  F       
Sbjct: 3   FTQLGLAEPLLRAIEKRGFSTPSPIQEKAIPEVLQGKDVLAAAQTGTGKTAGFGLPILQR 62

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           L+      G      RA+I+ PTRELA Q+            LK A+ +GG   + Q+ K
Sbjct: 63  LMEGQPVSGN---NVRALILTPTRELAAQVEESIRAFSEFLPLKTAVVFGGVGINPQMMK 119

Query: 131 LQSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPK 190
           L+ GVD+LI T GR++D Y+Q     + ++ +VLDEADRM D+GFI DI+ + + +P+  
Sbjct: 120 LRKGVDVLIATPGRLLDLYQQNAVKFSQLEVLVLDEADRMLDMGFIHDIKRVLKLLPQ-- 177

Query: 191 DRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL 250
           +R ++LFSAT S  +  LA     NP  +   P   T   +Q+ L       K   L  L
Sbjct: 178 ERQSLLFSATFSDEITALAKTITRNPVSISTAPANTTVEAVQQHLVTIDKSKKTTALICL 237

Query: 251 IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDIL 310
           I+++  ++ ++F+ TKH   +I   L         + G+  Q  R + L  F  G + +L
Sbjct: 238 IKQQKWEQVLVFSRTKHGANRIAEKLTRSKIPSAAIHGNKSQGARTKALADFKNGAIKVL 297

Query: 311 VATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLPA 370
           VATD+AARG+ I ++  V N DLP+   DYVHRIGRTGRAGASG + SF C E   NL  
Sbjct: 298 VATDIAARGIDISELPIVVNLDLPNTAADYVHRIGRTGRAGASGQAWSFVCAEELQNLKD 357

Query: 371 IESYIEHAIPTSDYDPSALLTDLPAPLSLRSSPQQRR--------TNTAGSRNSNNGGNR 422
           IE+ I+  +P    +          P++  S P++ +           +GS    +G N+
Sbjct: 358 IETLIQKLLPRETLE--GFEPQQAVPVTTLSKPKKPKKPKKPKAPQGESGSEGKRSGENK 415

Query: 423 KPQQRR 428
           K  QR+
Sbjct: 416 KSGQRQ 421