Pairwise Alignments

Query, 438 a.a., ATP-dependent RNA helicase RhlB from Vibrio cholerae E7946 ATCC 55056

Subject, 383 a.a., ATP-dependent RNA helicase RhlB from Acinetobacter radioresistens SK82

 Score =  311 bits (797), Expect = 2e-89
 Identities = 163/376 (43%), Positives = 238/376 (63%), Gaps = 1/376 (0%)

Query: 11  FADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNH 70
           F    L P++   ++  GF   TPIQ   L   L+G D  G+AQTGTGKT AFL +  N 
Sbjct: 5   FETLNLHPKLKKAIDALGFKEMTPIQQKVLNYTLAGHDAIGRAQTGTGKTAAFLISVIND 64

Query: 71  LLTTPAAEGRAETQPRAIIMAPTRELAIQIFNDAEPLLASTGLKAALAYGGESYDKQLAK 130
           LL  P  E R   + RA+I+APTRELA+QI +DA+ L   T L      GG  +DKQ  +
Sbjct: 65  LLNNPIKEQRYRGEARALILAPTRELALQIESDAKELTKFTDLHLVTLLGGVDFDKQKKQ 124

Query: 131 L-QSGVDILIGTTGRIIDFYKQRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEP 189
           L Q+ VDI++ T GR+IDF +Q+   L+ I+ +V+DEADR+ D+GFI  ++ + R  P  
Sbjct: 125 LDQNFVDIIVATPGRLIDFVEQKEVWLDQIEFLVIDEADRLLDMGFIPSVKRIVRFSPRK 184

Query: 190 KDRLNMLFSATLSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQT 249
           + R  ++FSAT SY V  LA + +  P  V +EPE+KT   +++ ++  +N  K  LLQ 
Sbjct: 185 EQRQTLMFSATFSYDVLNLAQQWLFEPVTVEIEPEKKTNADVEQRVYMVANRDKYKLLQE 244

Query: 250 LIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILEQFTQGDVDI 309
           ++ +E  ++ +IFAN + +  +++ HL  D ++V +L+G++ Q KR ++L+QF  G  +I
Sbjct: 245 ILRDEPIEKVMIFANRRDQVRRLYDHLKKDGYKVVMLSGEIAQDKRLKMLDQFKNGKHNI 304

Query: 310 LVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISFACEEYAINLP 369
           ++ATDVA RG+H+  V+HV N+ LP+  +DYVHRIGRTGRAGA G SISF  E+ A  LP
Sbjct: 305 MIATDVAGRGIHVDNVSHVINFTLPEQSDDYVHRIGRTGRAGAQGVSISFLSEDDAFYLP 364

Query: 370 AIESYIEHAIPTSDYD 385
           AIE  I   +P +  D
Sbjct: 365 AIEKAIGQKLPLTRLD 380