Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1102 a.a., PAS-domain containing protein from Rhodanobacter sp000427505 FW510-R12

 Score =  761 bits (1965), Expect = 0.0
 Identities = 459/1142 (40%), Positives = 669/1142 (58%), Gaps = 68/1142 (5%)

Query: 10   SLAYLGVLFLIAWYGDRQTRWLANWRPWIYSLSIAVYCTSWTFYGTVGQASVNPWSFLPI 69
            +L +LG+LF +A  G+R+          +Y+LS+A++CTSWTFYGTV QAS + W   P 
Sbjct: 11   ALCWLGLLFGVALLGERRPHIFEKRWAIVYALSLAIHCTSWTFYGTVTQASRSGWWLPPT 70

Query: 70   YIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVLGILPYI 129
            ++  ILM++F    L R++ + +  +  SLAD IA R G+  GLA  VTV+ V+GI+PYI
Sbjct: 71   FVGAILMYLFALGFLRRMVQLVREYNAGSLADLIAVRLGRHPGLAALVTVVVVIGIVPYI 130

Query: 130  ALQLRGITMGLNIVAP-DLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEHHRGMM 188
            ALQL+ + M   I++   L     +Q+S +  +V L +ALF MLFGTR      H+RG++
Sbjct: 131  ALQLKAVAMSYGILSHGQLAESSPWQDSAL--YVALLMALFAMLFGTRRASTMAHNRGLV 188

Query: 189  MAIAFESIVKLVAFLCVGVFIAYLAWRTDGLELSTIAASTYQAPNWPTLLIHTLLTMIAI 248
            +A+AFES+ KL A L +G  + + A   D   L     +   +  +P L+   LL  +A+
Sbjct: 189  LAMAFESLFKLGAMLALGTLL-FAALPAD---LPANVPAPPDSSGFPALI---LLGALAM 241

Query: 249  VCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQGLL--PNTSPDTFV 306
              +P QF+  +VE      L TARWLFP+YLLL+SL +LP+A  G   L     S D +V
Sbjct: 242  FTMPHQFYAGIVECREDGQLRTARWLFPLYLLLISLPILPLARLGDAWLGASGVSSDMYV 301

Query: 307  ISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLLLRRMRLSQRTHR 366
            ++LP+  G H +AL+AFLGG SAA+ MV+++T+ L++MV N  V PL +R     +  H 
Sbjct: 302  LALPLARGEHGLALVAFLGGLSAATSMVVIATLTLSLMVVNHFVAPLRVRA-GWGRDEHG 360

Query: 367  HFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQFAPAIFGGMYWRE 426
               G L+  RR  IL+++  AW +  +L    +L+ IG +SFSA+    PA+   +Y  +
Sbjct: 361  DLRGELLNYRRVAILVVILLAWAYSRLLAGNEALADIGAISFSALAGLTPALLAAVYRPQ 420

Query: 427  GNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNVLLWVITPP---DWLVALGLKS-AD 482
               + V  GLA G  +WL  ++ A         +++  W+   P    WL   GL    +
Sbjct: 421  LGSRAVMAGLAAGTLVWLYAVLPAL-------LSSMPAWLHDGPFGLHWLAPDGLLGLGN 473

Query: 483  WGML-LSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENMSLYQSRVTVGELEM 541
            W  L  +V ++ L  + V L    S   R+     VG               V + EL  
Sbjct: 474  WNRLGRAVVVSLLLNVAVMLAMAGSRYGRVARTVSVGD--------------VGLVELRA 519

Query: 542  LASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTERVLAGVFGASSAKLVLTSA 601
            LA+RF+   RV   FA   +           A SA +   E  LA V GA+SA+L+L   
Sbjct: 520  LAARFLPPERVEYLFASAPAAG--------PAGSARVAEVEHELAAVIGAASARLLLEVV 571

Query: 602  LQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELF 661
             +  +  L+ V  IV EA++   F++ +L+ A+E++ QGI VVD +LRLVAWN  Y  LF
Sbjct: 572  HRQGRDDLDTVVAIVGEAAQDLRFNQRVLEAALENMSQGICVVDAELRLVAWNTPYARLF 631

Query: 662  EFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVI 721
            ++PP ++QVGRP+A++ RHN   G+ GPG+ E  V+RR+ H+ +GT H S R   DG ++
Sbjct: 632  DYPPEMLQVGRPVAELTRHNIDIGMLGPGEVEQRVQRRLAHMREGTRHLSERRFPDGTIV 691

Query: 722  EVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQR 781
            E++GNPMPGGGFV +FTD+T FR+AE +LK  NETLE RV  RT       ++L  A+  
Sbjct: 692  EIRGNPMPGGGFVATFTDVTAFRQAEAALKRINETLELRVEART-------RELAAASAE 744

Query: 782  SERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLI 841
            ++  +++KSRFLAAV+HDLMQPL+AA+LFA +L+E   +A     A H+  AL A E L+
Sbjct: 745  AQAANEAKSRFLAAVTHDLMQPLHAAQLFAHALTERGGDA---ANARHLNGALAATEGLL 801

Query: 842  SDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKL 901
            + LLD++RLE G++   P +FA+ +VL  L AEF A+A  +GV+  +V +  WV SDP+L
Sbjct: 802  TGLLDVARLEGGRLHPQPRAFALAEVLDPLAAEFRAIAIDRGVRLDVVGTRAWVRSDPQL 861

Query: 902  LRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGG 961
            LRRV+QNFL+NA RY   G+V+LG RR   GQ+RI+VWD G GI  ++Q+ IF+EF R G
Sbjct: 862  LRRVLQNFLSNALRYGERGRVLLGTRR-RGGQLRIEVWDTGPGIAPEEQRLIFQEFRR-G 919

Query: 962  QVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVN 1021
                 QGLGLGL+I++ +A +LGH + +RSWPG+GSVF +    AQ +  S     A   
Sbjct: 920  SAAGGQGLGLGLSIAQRMADLLGHPLGLRSWPGRGSVFHVDAPVAQAVARSAPPAHAQ-- 977

Query: 1022 EKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIPDVILSD 1081
                 L   R L +DNEP  L  +  LL  WG  V  A +     +AL   W PD+ + D
Sbjct: 978  ---QPLPAGRALLLDNEPAALAALGSLLAGWGWHVHVARNAE---QALAAPWRPDLHILD 1031

Query: 1082 YRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRA 1141
            + LD G+TGL+V    R R  D    V+++ADR+ ++   +  +G   + KP+KPL LR 
Sbjct: 1032 FHLDGGQTGLDVWHLLRARYAD-VPTVMLTADRDGELRQRLLEAGVGVLYKPLKPLALRQ 1090

Query: 1142 LL 1143
            +L
Sbjct: 1091 VL 1092