Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1423 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

 Score =  209 bits (532), Expect = 1e-57
 Identities = 187/649 (28%), Positives = 301/649 (46%), Gaps = 67/649 (10%)

Query: 511  LQAAAFVGTPLPENENMSLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQ---RETL 567
            L AA    +P P +   S+  SRVT  E E+  +R      +RN       Q+    E L
Sbjct: 600  LDAATPGVSPAPSHPTRSV--SRVTELERELETTRAELEGAIRNLELSSEEQKAVNEEAL 657

Query: 568  LPNQQASSALIRHTERVLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSR 627
              N++  S      E +LA      S    LT AL G   QL+E  T+  + +   D   
Sbjct: 658  SVNEEFQST----NEELLASKEELQSLNEELT-ALNG---QLQE--TLERQRTTSSD--- 704

Query: 628  GLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLC 687
              LQ  +         +D ++++  +      LF   P    VGRP++D+    A   L 
Sbjct: 705  --LQNVLYSTDVATLFLDTEMKIRFFTPATRALFNVIPS--DVGRPLSDLNSLAADATLI 760

Query: 688  GPGDPEDHVRRRVYHLEQGTSHTSSRVRADG-----RVIEVQGNPMPGGGFVMSFTDITV 742
                       +    +Q         R DG     R++  +       G V++F D+T 
Sbjct: 761  --------TDVKAVLSDQAAQEQEIETR-DGAWYLRRILPYRTQAGGVDGVVITFVDVTE 811

Query: 743  FREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQ 802
             R A  +L+                         TA   +E  + +KSRFLAA SHDL Q
Sbjct: 812  RRRAADALE-------------------------TAKHDAELANNAKSRFLAAASHDLRQ 846

Query: 803  PLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSF 862
            PL +  L    L++VA   +V++L   ++  + A   +++ LLDI+++E+G I     +F
Sbjct: 847  PLQSLVLLQGLLAKVASGEKVERLVKRLDETISAMSGMLNALLDINQIEAGTIKAEIVTF 906

Query: 863  AIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKV 922
             I D+L  +  E +  A    +  S++P  L V SDP+LL ++++N ++NA +Y P G+V
Sbjct: 907  PINDLLDRMREELTYHARSAKLSLSVIPCSLSVESDPRLLEQMLRNLISNALKYTPRGRV 966

Query: 923  ILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQ--GLGLGLAISKGIA 980
            ++G RR     +RI+VWD GIGI + + + IF+E+++      ++  GLGLGL+I + + 
Sbjct: 967  LVGCRRHGP-WLRIEVWDTGIGIPETELRAIFDEYHQLHNAARERNLGLGLGLSIVQRLG 1025

Query: 981  HVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTV--AMVNEKGSELQHLRVLCVDNE 1038
             +L H + +RS P  GSVFSI +  A P P      +   +  +     +   VL ++++
Sbjct: 1026 RLLEHPVQVRSRPEHGSVFSIDVKLAPPAPERRVPALPAPLPGKDTGSRKAAAVLVIEDD 1085

Query: 1039 PDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWI-PDVILSDYRLDNGRTGLEVLQQC 1097
            PD+   +  LL   G  V  A D   ++  +E   I P++IL+DY L NG TGLE   + 
Sbjct: 1086 PDVRSLLELLLTTEGHAVTVAPDGDTAVALVERNAIRPELILADYNLPNGMTGLETASRL 1145

Query: 1098 RLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSL 1146
            R RLG     VI++ D +   L  I       + KP+K  +L  ++  L
Sbjct: 1146 RARLGRRIPVVIVTGDISTTTLRDIAGQDCVQLNKPVKADELTLIIQRL 1194