Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 924 a.a., Adaptive-response sensory-kinase SasA from Xanthobacter sp. DMC5

 Score =  407 bits (1045), Expect = e-117
 Identities = 260/677 (38%), Positives = 383/677 (56%), Gaps = 41/677 (6%)

Query: 5   LVIPVSLAYLGVLFLIAWYGDRQTRWLANW--RPWIYSLSIAVYCTSWTFYGTVGQASVN 62
           LVI V+  YL  LF IA + DR+ R   +     W+Y LS+AVYCT+WT++G+VG+A+  
Sbjct: 9   LVIGVAALYLAALFAIAAFADRRAREGRSLIGNAWVYGLSLAVYCTAWTYFGSVGRAATT 68

Query: 63  PWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAV 122
              FLPIY+ P L+ +  W V+ ++I IA    ITS+ADFIA+RYGKS  +A  VT+I V
Sbjct: 69  GVWFLPIYLGPTLVMLVAWVVVRKMIRIAHTYRITSIADFIASRYGKSPLVAAVVTLITV 128

Query: 123 LGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWF------VVLALALFTMLFGTR 176
           +GI+PYIALQL+ ++ G  +     +T  G Q +  SW+      V LALALFT+LFGTR
Sbjct: 129 VGIVPYIALQLKAVSAGYTV-----LTATGAQAAAPSWWQDGTLLVALALALFTILFGTR 183

Query: 177 HIDNTEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLAW--------RTDGLE-----LST 223
           H+D+ E H GM+ A+A ES+VKLVAFL VG F+ Y  +        R   L      L+ 
Sbjct: 184 HLDSAERHEGMVAAVAAESLVKLVAFLAVGAFVTYGLFGGFADVWARASALPGVKGLLTL 243

Query: 224 IAASTYQAPNWPTLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMS 283
             A  +    W +L   TLL+ ++++ LPRQF  MVVE    + L  A W+FP YLL ++
Sbjct: 244 SGAGNFAWAQWFSL---TLLSGLSVLLLPRQFQMMVVECVDERHLKRAAWVFPAYLLAIN 300

Query: 284 LFVLPIAWTGQGLL-PNTSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALA 342
           +FVLP+A  G  LL     P+TFV++LP+  GA  +AL+A++GG SAA+GM+IV TIA++
Sbjct: 301 IFVLPLALGGLVLLGKGADPETFVLTLPLAHGAGGLALIAYVGGLSAATGMLIVETIAVS 360

Query: 343 IMVSNDLVMPLLLRRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSA 402
            MV NDLVMP LL R++L +      + LL+ IRR  IL +L   + +++V     +L +
Sbjct: 361 TMVCNDLVMPALL-RLKLIRADGGDLTRLLLNIRRAAILGVLLLGYLYFVVAGEAYALVS 419

Query: 403 IGFLSFSAITQFAPAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNV 462
           IG +SF+A+ QFAPA+ GGMYWR   R G   GL  GF +W  TLM  +   +G      
Sbjct: 420 IGLISFAAVAQFAPALLGGMYWRGATRLGALGGLLGGFAVWAYTLMLPSVAKSGWMDAAF 479

Query: 463 L------LWVITPPDWLVALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAF 516
           L      +  + P       GL +    +  S+ +N + Y+G+SL    S  E  QA  F
Sbjct: 480 LTHGPFGIAALAPERLFGLSGLDNLSHALFWSLFVNGVLYVGLSLWRAPSGREASQALLF 539

Query: 517 VGTPLPENE--NMSLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQAS 574
           V          +   ++ R    +LE LA R +G    R  F  +        + +  A 
Sbjct: 540 VDVFARGRSAADPVFWRGRAHRADLEALARRLLGADTARQIFEDHARDSGTGDVADLTAD 599

Query: 575 SALIRHTERVLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQ--G 632
           + L+   ER +AG  GA+SA++++ +      +   +V  I++EAS+L  ++R L +   
Sbjct: 600 ARLVDIVERRIAGAVGAASARVLVAAVADEEPLNAGDVMDILNEASQLRVYARALEEKSR 659

Query: 633 AIEHIGQGIAVVDKQLR 649
           ++E     ++  + QLR
Sbjct: 660 SLEIASAELSAANAQLR 676



 Score = 98.6 bits (244), Expect = 2e-24
 Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 26/349 (7%)

Query: 693  EDHVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLK- 751
            EDH R      + GT   +  + AD R++++    + G     S   +      E+ L  
Sbjct: 582  EDHAR------DSGTGDVAD-LTADARLVDIVERRIAGAVGAASARVLVAAVADEEPLNA 634

Query: 752  -----MANETLEERVLQRTLE-----LEKLNKQLVTATQRSERESQSKSRFLAAVSHDLM 801
                 + NE  + RV  R LE     LE  + +L  A  +     + K  F+++V+H+L 
Sbjct: 635  GDVMDILNEASQLRVYARALEEKSRSLEIASAELSAANAQLRTLDELKDDFMSSVTHELR 694

Query: 802  QPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDL---ISDLLDISRLESGKIDLH 858
             PL A R  +  + +   + E ++    +   +G +E L   ++ +LD++++ESG  + H
Sbjct: 695  TPLTAIRALSELMLDTP-DMEAEQRQDFLRIIVGESERLGRLVNQVLDMAKIESGHAEWH 753

Query: 859  PHSFAIMDVLSNLNAEFSALAAKQGVQFSLVP--SLLWVHSDPKLLRRVIQNFLTNAFRY 916
                 +  ++++     + LA  +G +  L    S+  V +DP  L +V+ N ++NA ++
Sbjct: 754  STDVDLKALVADAVKATAELARTKGAEIVLTAPASVPSVKADPDRLTQVMLNLISNAAKF 813

Query: 917  NPNGKVILGVRRVATGQ-VRIDVWDNGIGIEQDKQQEIFEEFNRGGQ-VRSDQGLGLGLA 974
             P     + VR +A    + + V DNG G+    +  IFE+F +GG  +    G GLGL 
Sbjct: 814  VPAQGGRIDVRLLADADGLEVQVEDNGPGVPPADRDTIFEKFRQGGDALNRPPGTGLGLP 873

Query: 975  ISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEK 1023
            IS+ I    G  I +    G+G+ F+  L       ++ TQT +   E+
Sbjct: 874  ISRRIVDHFGGKIWLDQKAGKGACFAFRLPLRSQGANAPTQTTSAEAEE 922