Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1156 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 585/1155 (50%), Positives = 802/1155 (69%), Gaps = 25/1155 (2%)

Query: 5    LVIPVSLAYLGVLFLIAWYGDRQTRWLA-NWRPWIYSLSIAVYCTSWTFYGTVGQASVNP 63
            L+  V+LAY+ ++F IA+YGDR+   L    R W+YSLS+AVYCTSWTF+G VGQA+   
Sbjct: 7    LIATVALAYMAIMFAIAFYGDRRRAPLPPRMRAWVYSLSLAVYCTSWTFFGAVGQAAEQL 66

Query: 64   WSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVIAVL 123
            W+FLPIY+ P+L+ V    VL ++ILI+K+E+ITS+ADFIAARYGKSQ LAV V +I ++
Sbjct: 67   WAFLPIYLGPVLLLVLAPWVLQKMILISKQENITSIADFIAARYGKSQSLAVVVALICLV 126

Query: 124  GILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHIDNTEH 183
            G+LPYIALQL+GI +G+N++        G +    +  V L LALFT++FGTR++D TEH
Sbjct: 127  GVLPYIALQLKGIVLGVNLLIGAGADTTGTRAQDTALIVSLVLALFTIVFGTRNLDATEH 186

Query: 184  HRGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDGLELSTIAASTY------QAPNWPTL 237
            HRGM++AIAFES+VKL+AFL VG F+ Y  +   G   S    +        +  NWP++
Sbjct: 187  HRGMVLAIAFESLVKLLAFLAVGAFVTYGLYDGFGDLFSQAMLAPRLDEYWKETVNWPSM 246

Query: 238  LIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQGLL 297
            ++ T + M+AI+CLPRQFH  VVEN  PQDL  A+W+FP YL+L +LFV+PIA  G+ LL
Sbjct: 247  VVQTGVAMMAIICLPRQFHVTVVENIDPQDLRLAKWVFPAYLVLAALFVIPIALGGKMLL 306

Query: 298  PNTS-PDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLLLR 356
            P++  PD++VISLP+      +A+LAF+GG SAA+GMVIV++IAL+ MVSND+++P LLR
Sbjct: 307  PSSVLPDSYVISLPMAEAHPALAVLAFIGGASAATGMVIVASIALSTMVSNDMLLPWLLR 366

Query: 357  RMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQFAP 416
            R   ++R    F   ++ +RR  I+++L  A+  Y +L S  SL+ IG ++F+A+TQ AP
Sbjct: 367  RSS-AERPFEVFRHWMLSVRRVSIVIILLLAYVSYRLLGSTASLATIGQIAFAAVTQLAP 425

Query: 417  AIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNV---LLWVITPPDWL 473
            A+ G +YW++ NR+GV+ GLA G  LW  TL+      +   S ++   L W+ + P   
Sbjct: 426  AMLGALYWKQANRRGVFAGLAAGTFLWFYTLVLPVTAKSLGWSLSLFPGLTWMHSHP--- 482

Query: 474  VALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENMSLYQSR 533
            + L + S   G + S+  N   ++ VS+++R  +SE  QA  F+G  + +  +     S 
Sbjct: 483  LGLSVTSLTLGTVFSLAGNFTLFVWVSMLSRTRVSEHWQAGRFIGQEISQRASARSMLS- 541

Query: 534  VTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTERVLAGVFGASS 593
            V + +L  LA+RFVG  R + +F ++  +Q +   PNQ A +  I HTER+LAGV GASS
Sbjct: 542  VQISDLLSLAARFVGEERAQQSFIRFAYRQGKGFNPNQNADNDWIAHTERLLAGVLGASS 601

Query: 594  AKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAW 653
             + V+ +A++GR+MQLE+V  I DEASE+  F+R LLQGAIE+I QGI+VVD+ L+LVAW
Sbjct: 602  TRAVVKAAIEGREMQLEDVVRIADEASEVLQFNRALLQGAIENITQGISVVDQSLKLVAW 661

Query: 654  NQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSR 713
            N+RYLELF +P GLI VGRPIAD+IR+NA++GLCGPG+ E HV RR++ + QG +HTS R
Sbjct: 662  NRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEAEVHVARRLHWMRQGRAHTSER 721

Query: 714  VRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNK 773
            +  +GRVIE+ GNPMPGGGFVMSFTDIT FREAEQ+L  ANE LE+RV  RT EL +LN 
Sbjct: 722  LFPNGRVIELIGNPMPGGGFVMSFTDITAFREAEQALTEANEGLEQRVTARTYELSQLNV 781

Query: 774  QLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEV--AKEAEVQKLAHHIE 831
             L  A   +E  SQSK+RFLAAVSHDLMQPLNAARLF+++LS       +E ++L  H++
Sbjct: 782  ALTDAKGVAESASQSKTRFLAAVSHDLMQPLNAARLFSAALSHQNDGLSSEARQLVQHLD 841

Query: 832  SALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPS 891
            S+L +AEDLISDLLDISRLE+GKI+     F + ++   L AEF ALA +QG++F L  S
Sbjct: 842  SSLRSAEDLISDLLDISRLENGKINPQRQPFVLNELFDTLGAEFKALAQEQGLRFRLRGS 901

Query: 892  LLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQ 951
             L V SD KLLRR++QNFLTNAFRY  +G V+LGVRR   G++ ++VWD G GI  DKQ+
Sbjct: 902  RLRVDSDIKLLRRILQNFLTNAFRY-ADGPVLLGVRR-RKGELCLEVWDRGPGIPLDKQK 959

Query: 952  EIFEEFNR--GGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPM 1009
             IFEEF R    Q R+++GLGLGLAI+ G+  VLGH +S+RSWPG+GSVFS+ +  A+  
Sbjct: 960  VIFEEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHRLSVRSWPGKGSVFSVRVPLAR-- 1017

Query: 1010 PSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKAL 1069
             + ++  +    E G  L   +VLCVDNE  IL+GMR LL RWGCEV TATD       L
Sbjct: 1018 -NQVSAPIKPPQENGLPLSGAQVLCVDNEESILIGMRSLLTRWGCEVWTATDQAQCAALL 1076

Query: 1070 EGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRF 1129
                 P + L DY LD+G TG E++   R +L +   GV+ISAD  P+++  + ++G  +
Sbjct: 1077 ADGVRPQLALVDYHLDHGETGTELMGWLRAQLAEPIPGVVISADGRPEMVAEVHAAGLDY 1136

Query: 1130 MAKPIKPLKLRALLN 1144
            +AKP+KP  LRALL+
Sbjct: 1137 LAKPVKPAALRALLS 1151