Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  285 bits (729), Expect = 8e-81
 Identities = 170/432 (39%), Positives = 256/432 (59%), Gaps = 23/432 (5%)

Query: 732  GFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVT-------------- 777
            G  +   DIT  R   ++L  A + LE+RV QRT EL  LN QL+               
Sbjct: 205  GIFVLIRDITERRRTAEALHQAYQHLEQRVAQRTSELTALNDQLLQEIDERRRVEARLRE 264

Query: 778  ATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAA 837
            A   +E+ + SK++FLAAVSHDL+QPLNAARLF S+L E   E  V+ +++ +E      
Sbjct: 265  AKLEAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERPSETLVRNVSNSLEDV---- 320

Query: 838  EDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHS 897
            E+L+  L+DIS+L++G I      FA+ ++L NL AE++ LA  +G+    V     V S
Sbjct: 321  ENLLGTLVDISKLDAGVIKADIAPFALSELLDNLAAEYTELARSEGLALHFVGCSALVRS 380

Query: 898  DPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEF 957
            D +LL R+++N L+NA RY  NG+V+LG RR    ++ I VWD+G+GI +++ +EIF+EF
Sbjct: 381  DIQLLARILRNLLSNAIRYTYNGRVVLGCRR-QHQRLLIQVWDSGMGIAEERLEEIFQEF 439

Query: 958  NRGGQVRSDQ--GLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQ 1015
             RG   R DQ  GLGLGLAI + IA +LGH IS++SWPG+GS+FS+ +  +   P SL  
Sbjct: 440  KRGDVQRPDQDRGLGLGLAIVEKIAGILGHRISVKSWPGKGSMFSVEVPLSATAPKSL-P 498

Query: 1016 TVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWI- 1074
             +AM       LQ  RV  +DN+  I  GMR LLE WGC+V TA       + ++     
Sbjct: 499  ILAMSEPMLERLQGARVWVLDNDAAICAGMRTLLEGWGCQVITALSEQDLARQVDNYHAE 558

Query: 1075 PDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPI 1134
             D++++DY LD+ + G++ + +   R G     ++I+A+ + ++   I   G   M KP+
Sbjct: 559  ADLLIADYHLDDDQNGVDAVARINGRRGRAIPALMITANYSNELKQQIRELGHTLMHKPV 618

Query: 1135 KPLKLRALLNSL 1146
            +P+KL+  ++ L
Sbjct: 619  RPMKLKTAMSHL 630