Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 660 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  189 bits (480), Expect = 6e-52
 Identities = 140/406 (34%), Positives = 207/406 (50%), Gaps = 28/406 (6%)

Query: 755  ETLEERVLQ-RTLELEKLNKQLVTATQR---SERESQSKSRFLAAVSHDLMQPLNAARLF 810
            + L ER+   R +  E++ +    A QR   +E+ + S++RFLAA SHDL QPL+A  LF
Sbjct: 261  DRLAERLQHNRQVSEERVREATAVALQRMAEAEQAALSRARFLAAASHDLRQPLHAMGLF 320

Query: 811  ASSLSEVAKEAEVQKLAHHIESA--LGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVL 868
               L   A  A+   +    ES   +G    L+ DLL+ISRL++  +       ++  + 
Sbjct: 321  IDGLLPGATPAQRPAVLRLQESTEFMGV---LLDDLLEISRLDAQVLTPAITKVSLAALF 377

Query: 869  SNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRR 928
              ++A+ +A AA+  V+       L V +D  +LRR++ N ++NA R+ P+G  +L   R
Sbjct: 378  DQIDAQHAATAAEARVRLHWSDRGLAVRTDAAMLRRIVGNLVSNALRHAPDGGTVLVAAR 437

Query: 929  VATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSD--QGLGLGLAISKGIAHVLGHH 986
                 VRI+V DNG+GI    Q  IFEEF +      D  +G GLGLAI   IA +LG  
Sbjct: 438  RCAAGVRIEVRDNGVGIAPIHQGRIFEEFYQVANTERDRRRGFGLGLAICARIATLLGTR 497

Query: 987  ISMRSWPGQGSVFSITL------DRAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPD 1040
            I++RS    GS F+ TL      D  QP P     T          L  LR L VD++P 
Sbjct: 498  ITVRSALQAGSTFAFTLPAARAADAVQPEPPQFAPT---------PLAGLRCLVVDDDPA 548

Query: 1041 ILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIP-DVILSDYRLDNGRTGLEVLQQCRL 1099
            IL G R LL +WGC+ +  T    ++  L G  +  D +L D +L     G++VL   + 
Sbjct: 549  ILDGSRTLLAQWGCQAECVTTGAEAIARLGGGDVHYDAVLCDLQLAGDDDGVDVLDAAKR 608

Query: 1100 RLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRALLNS 1145
               D  A V++S    P++L  +   G   + KP+ P KLRALL +
Sbjct: 609  LQPDALA-VLVSGATGPEVLQRLRQGGVMLLTKPVAPAKLRALLTT 653