Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  165 bits (417), Expect = 1e-44
 Identities = 130/395 (32%), Positives = 197/395 (49%), Gaps = 17/395 (4%)

Query: 762  LQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEA 821
            L    E E L +QL      ++R S+ K+RFLAA SHDL QPL+A  LF + + +  K +
Sbjct: 196  LTMRFEKEALAEQLSHQIAATQRASEEKTRFLAAASHDLRQPLHAIALFGAVIEKKLKGS 255

Query: 822  EVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAK 881
            +    A  +  A+G   D +  LLDISRL++G++        +  +   LN  F A AA 
Sbjct: 256  DEWDHAVRLMDAVGTLGDSLDILLDISRLDAGEVAPQVRPVELNPLFLALNNVFVAQAAD 315

Query: 882  QGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQ-VRIDVWD 940
              +Q  L  +  WV SDP+LL+R++ N + NA +Y   G V++  R  A G  V IDV D
Sbjct: 316  LDLQLRLRATPCWVLSDPQLLQRLLSNLVHNALKYTTRGGVVVAAR--ARGPLVWIDVCD 373

Query: 941  NGIGIEQDKQQEIFEEF---NRGGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGS 997
             GIGI  +    IF+EF   +  G+ R+ +GLG+GL+I + ++ +L H + +RS    GS
Sbjct: 374  TGIGIADEHLGRIFDEFYQIDNPGRDRT-KGLGIGLSIVQRLSRLLAHPLQVRSRLHHGS 432

Query: 998  VFSITLDRAQPMPSSLTQTVAMVNEKGSELQ-HLRVLCVDNEPDILVGMRDLLERWGCE- 1055
             F + L     + S       +    G+ L    RVL +D+E  I   +  LL+  G   
Sbjct: 433  RFRLVLPAVTALGSP-----PLAALPGAPLPLPRRVLVIDDEAAIRQAVAGLLQAHGLSV 487

Query: 1056 --VKTATDIHGSL-KALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISA 1112
              V +  D    L  A  G    +V+L D RL +G  GL   Q+ R R G     ++I+ 
Sbjct: 488  DAVASEADAEAVLAHAAHGSTPVEVLLCDVRLADGADGLAAAQRLRARFGPGLQVLLITG 547

Query: 1113 DRNPDILDGIESSGFRFMAKPIKPLKLRALLNSLS 1147
            +  P     +  SG + + KP+   +L   L SL+
Sbjct: 548  ETAPQRQRQMRDSGLQVLLKPVAADRLLQALASLT 582