Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 749 a.a., Two-component system sensor histidine kinase from Sphingobium sp. HT1-2

 Score =  291 bits (745), Expect = 1e-82
 Identities = 198/539 (36%), Positives = 278/539 (51%), Gaps = 38/539 (7%)

Query: 629  LLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLI-------QVGRPIADVIRHN 681
            +LQ  ++++ +G+ V D   +L AWN     L   P           ++ R   + +  +
Sbjct: 226  VLQSTLDNLSEGVCVFDGSGQLAAWNDALRRLLALPENFAGALGSHAELQRWCRETLAMD 285

Query: 682  AQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDIT 741
             Q  L   G   D  +  V     G  H            E++ N M  GG V  FTD+T
Sbjct: 286  DQGCLDWRGGGADQ-QAMVCLCTAGERH-----------FELRSNAMADGGQVFGFTDVT 333

Query: 742  VFREAEQSLKMANETLEERVLQRTLELEKLNKQL--------------VTATQRSERESQ 787
                A+ SL+   ETLE RV +RT EL  LN++L              + A   +E+ + 
Sbjct: 334  DMLRAQASLQETAETLERRVSERTGELVDLNRKLEGEVAERRAIEAALIDAKIVAEKANL 393

Query: 788  SKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDI 847
            SK+RFLAA SHDL+QPLNAARLF ++L +       + L +   +AL + EDL+  LL+I
Sbjct: 394  SKTRFLAAASHDLLQPLNAARLFVAALGDRRLALPTRALVNQTSTALDSVEDLLEALLEI 453

Query: 848  SRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQ 907
            SRL++G I      F I  +L  LN EF+ +A   G+ F +    LWV +D +LLRR++Q
Sbjct: 454  SRLDAGAIQPEIGPFRIDRLLQTLNVEFAPMARSAGLAFRIEAQPLWVETDLRLLRRILQ 513

Query: 908  NFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQ 967
            NF++NA RY P G V +   +    +V I V D+G GI  ++Q  IFEEF R    RS Q
Sbjct: 514  NFISNAIRYTPRGTVSVACIQ-HDDRVEISVTDSGPGIAPEQQALIFEEFRR-LDTRS-Q 570

Query: 968  GLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEKGSEL 1027
            G GLGLAI K  + +LGH IS+RS PGQG+ F+I L   QP       T     ++   +
Sbjct: 571  GKGLGLAIVKRASDMLGHPISLRSQPGQGATFAIALPIGQPQREEDGDTGQPTRDR--SM 628

Query: 1028 QHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIPDVILSDYRLDNG 1087
            + L VL VDNE  I  GMR LL  WGC V TA     +         PD+IL DY L +G
Sbjct: 629  RDLSVLVVDNEKQIQSGMRTLLTGWGCSVVTADGYDQAAALFADGRRPDIILVDYHLKDG 688

Query: 1088 RTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSL 1146
             TG  V+ +     G     V+ISADR   +   + ++    + KP+KP +LRALL ++
Sbjct: 689  ETGDTVITRLHDHFGVRIPAVMISADRGEPLKTQLAAANIPLLNKPVKPAQLRALLRTM 747



 Score = 49.3 bits (116), Expect = 1e-09
 Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 17/218 (7%)

Query: 564 RETLLPNQQASSALIRHTER---VLAGVFGASSAKLVLTSALQGRKMQLEEVA------- 613
           RE +   ++ + AL+   ER   + A  F      + L + ++ R +QLE+         
Sbjct: 18  REEVRKLRKINGALMDRVERSTDMSANAFSMFETAISLEAKVRDRTLQLEDALGRLAKAN 77

Query: 614 TIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRP 673
             + EA    D ++  L+ AIE I +G  + D + RL+ +N+ YL  +      +     
Sbjct: 78  ADLAEAHADADAAQVRLRDAIESINEGFVLFDAEDRLILYNEAYLGFWPQVAERLDQNLT 137

Query: 674 IADVIRHNA-QQGLCGPG-DPEDHVRRRVYHLEQGTSHTSSRVR-ADGRVIEVQGNPMPG 730
             D+ R  A  QG  G    P+  V  R+   + G +      R ADGR I++       
Sbjct: 138 FHDIARIAAHSQGPAGAQVAPDRWVSDRL--AKHGIADGGQVQRLADGRWIQINELRTSE 195

Query: 731 GGFVMSFTDITVFREAEQSLKMANETLEER-VLQRTLE 767
           GG V  +TDIT   +AE +   A E  E   VLQ TL+
Sbjct: 196 GGIVGIYTDITE-AKAEDARARARELAERNVVLQSTLD 232