Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score =  281 bits (720), Expect = 9e-80
 Identities = 202/614 (32%), Positives = 317/614 (51%), Gaps = 52/614 (8%)

Query: 571  QQASSALIRHTERVLAGV------FGASSAKLVLTSALQGRKMQLEEVATIVDEASELYD 624
            Q+ + ALI   ER+ +GV      + A    +VL   ++ R   L +    +   + L  
Sbjct: 27   QRINDALI---ERIESGVTRGNDPYAAFQHSVVLAEQVRERTDALNQAMAELKAVNRLLS 83

Query: 625  FSRGLLQGAIEHIGQGIAVVDKQLRLVAW----------NQRYLELFEFPPGLIQVGRPI 674
             +R   + A +H  Q   + D    L+A+          N+ Y E + +P G + +G+ +
Sbjct: 84   EARQRAETAHQH--QIRLITDNVPALIAYLNADLVYEFTNKVYEEWYCWPHG-VMLGQSL 140

Query: 675  ADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVI--EVQGNPMPGG- 731
             +       Q L      E +V R +           + +    R +      N +  G 
Sbjct: 141  REAHSEQHYQRL------EGYVARALAGESVTFEFAETNINGQERYMLRSYVPNRLASGE 194

Query: 732  --GFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQ-RSERESQ- 787
              G  +   DIT  R   Q+L  A + LE+RV +RT EL  LN QL+   + RS+ ES+ 
Sbjct: 195  VVGIFVLIRDITERRNTAQALHQAYQHLEQRVRERTAELTSLNDQLLREIEERSQAESRL 254

Query: 788  ------------SKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALG 835
                        SK++FLAAVSHDL+QPLNAARLF S+L E  +      L  ++ ++L 
Sbjct: 255  REAKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQNAAHLVRNVSNSLE 314

Query: 836  AAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWV 895
              E+L+  L+DIS+L++G I      FA+ +++ NL AE+  +A  +G++   V     V
Sbjct: 315  DVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSEGLELHFVGCSAVV 374

Query: 896  HSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFE 955
             SD +LL R+++N L+NA RY P+G+V+LG RR+  G VRI+VWD+GIGI ++  Q++F 
Sbjct: 375  RSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRL-RGGVRIEVWDSGIGIAEEHLQDMFL 433

Query: 956  EFNRGGQVRSDQ--GLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSL 1013
            EF RG   R DQ  GLGLGLAI + IA +LGH I +RSW G+GSVF++ +  +   P + 
Sbjct: 434  EFKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQ 493

Query: 1014 TQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQW 1073
               V +       L+  RV  +DN+  I  GMR LLE WGC V TA       + ++   
Sbjct: 494  PSQV-ICEPMLERLRGARVWVLDNDAAICAGMRTLLEGWGCRVVTALSEEDLARQVDNYH 552

Query: 1074 I-PDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAK 1132
               D++++DY LDN   G++ + +   R       ++I+ + + D+   I   G   M K
Sbjct: 553  ADADLLIADYHLDNDCNGVDAVARINARRAQPLPALMITVNYSNDLKQQIRELGHTLMHK 612

Query: 1133 PIKPLKLRALLNSL 1146
            P++P+KL+  ++ L
Sbjct: 613  PVRPMKLKTAMSHL 626