Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 907 a.a., histidine kinase from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  404 bits (1038), Expect = e-116
 Identities = 238/659 (36%), Positives = 384/659 (58%), Gaps = 30/659 (4%)

Query: 1   MQGWLVIPVSLAYLGVLFLIAWYGDRQTRWLANW--RPWIYSLSIAVYCTSWTFYGTVGQ 58
           M  WLVI VS  YL +LF +A + +R++    ++   P++Y+LS+AVYCT+WT+YG+VG+
Sbjct: 1   MNYWLVIGVSFLYLALLFGLASWAERRSAAGKSFVGNPYVYALSMAVYCTAWTYYGSVGR 60

Query: 59  ASVNPWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVT 118
           A+ +   +L IY+ P LM    W VL ++I I K + IT++ADFI++RYGKS  L   VT
Sbjct: 61  AATSGLEYLAIYVGPTLMAPLWWVVLRKIIRICKVQRITTIADFISSRYGKSITLGSLVT 120

Query: 119 VIAVLGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHI 178
           V+ VLGI+PYI++QL+ I   L+I+    +    + ++  S+F+ + L LFT+++GTRHI
Sbjct: 121 VVCVLGIIPYISIQLKAIASSLSILTGTAIQQEAFPDT--SFFIAIGLGLFTIVYGTRHI 178

Query: 179 DNTEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDGLELSTIAASTYQAPNWPTLL 238
           + TE H GM+ AIAFES++KLV F+  GVF+ Y+ +         + A     PN+  L+
Sbjct: 179 EATERHEGMVAAIAFESVLKLVVFILAGVFVTYVVFNG----FDDVMARAQALPNFNRLM 234

Query: 239 IHT------------LLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFV 286
             +             L+M+AI+ LPRQF   VVEN   Q L+ A WLFP+YL  +++FV
Sbjct: 235 TFSGEGGFGEWFWMIFLSMLAILFLPRQFQVAVVENVNEQHLNKAMWLFPLYLFAINVFV 294

Query: 287 LPIAWTGQGLLPNTS--PDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIM 344
           LPIA  G  L    +   D FV+++P+  G   +ALL +LGG SAA+ MVIV+TIAL++M
Sbjct: 295 LPIALGGDLLFAPGAFDADMFVLAIPLSEGQSLLALLVYLGGYSAATSMVIVATIALSVM 354

Query: 345 VSNDLVMPLLLRRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIG 404
           +SN+LVMPL++             + +L+  RR  I+ +L  A+ +Y  +    SL  +G
Sbjct: 355 MSNNLVMPLMIGTPYFKTANQDRLTRILLYSRRLCIMAVLLLAYLYYKGVAEYYSLVEVG 414

Query: 405 FLSFSAITQFAPAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDMLAGDASNNVLL 464
            +SF+A+ QFAPA+ GG++W+EG + G   G+ VG  +W  TL+  + +  G    +V+ 
Sbjct: 415 LVSFAAVAQFAPAMIGGIFWKEGTKGGALAGIVVGSLVWFYTLVVPSIVGVGMLPTSVMS 474

Query: 465 WVITPPDWL---VALGLKSADW---GMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVG 518
                  WL      GL+   +    M  ++ LNT  YIGVSL+++ +  ER QA  FV 
Sbjct: 475 NGPLGIGWLKPFALFGLEGMGYISHAMFWTMFLNTGLYIGVSLLSQQTSQERNQAEVFVD 534

Query: 519 --TPLPENENMSLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSA 576
                   E+  +++    + +++ L   F+G  R   A + +  +         +A   
Sbjct: 535 IFRYSMVYESSIVWKGTAYIPDIKSLLVSFLGEQRTDKALSSFRRKYPAPEDATGKADPK 594

Query: 577 LIRHTERVLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIE 635
           L+ + E++L+GV G+SSA +++ S ++  ++ ++EV  I+ E+ +L   +  L + ++E
Sbjct: 595 LVTYAEKLLSGVIGSSSAHIMVASVVKEEEISIDEVLNILRESQQLISINNELRRKSME 653



 Score =  110 bits (275), Expect = 5e-28
 Identities = 75/272 (27%), Positives = 146/272 (53%), Gaps = 14/272 (5%)

Query: 740  ITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHD 799
            + + RE++Q + + NE     + ++++EL +  +QL +A +R +   + K  FL+ V+H+
Sbjct: 631  LNILRESQQLISINNE-----LRRKSMELRRATEQLRSANERLKLLDELKDDFLSTVTHE 685

Query: 800  LMQPLNAARLFASSL--SEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDL 857
            L  PL + R  +  L  +   + ++ +   H I         LI+ +LD+ R ESG+  L
Sbjct: 686  LRTPLTSIRALSEILYDNPEMERSDQEHFLHTIVKESERLTRLITHVLDLERFESGRQKL 745

Query: 858  HPHSFAIMDVLSNLNAEFSALAAKQGVQF--SLVPSLLWVHSDPKLLRRVIQNFLTNAFR 915
            +     + +V+       + L  ++ ++    +  SL  +++D   L +V+ N ++NA +
Sbjct: 746  NLEPVQLKEVIQESVEALAQLVQEKQIELVVDVQHSLPSINADRDRLIQVLVNLISNAIK 805

Query: 916  Y--NPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRG--GQVRSDQGLGL 971
            +    NG++I+    +  G V+++V DNG GI+ + Q+++F++F +     +R  +G GL
Sbjct: 806  FCSPENGRIIVSAYYI-DGNVKVNVVDNGKGIDAESQKQVFDKFYQAKHQNIRKPEGSGL 864

Query: 972  GLAISKGIAHVLGHHISMRSWPGQGSVFSITL 1003
            GLAISK I       + + S PG+G+ FS TL
Sbjct: 865  GLAISKKIIESHQGRLWVESEPGKGARFSFTL 896