Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1542 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  216 bits (551), Expect = 9e-60
 Identities = 131/378 (34%), Positives = 214/378 (56%), Gaps = 9/378 (2%)

Query: 762  LQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEA 821
            L+   E  ++ + L  A   +E+ S SK+RFLAA SHDL QP+ A  +F   ++   +  
Sbjct: 1150 LEDVTEQVRVREALAAAKAAAEQASASKTRFLAAASHDLRQPVQALIMFHHLVAMQPQGE 1209

Query: 822  EVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAK 881
               KL   + +ALGA   ++ D+LD+SRL++G I++   S  +  ++++L AEF+ LA  
Sbjct: 1210 AAGKLLVSMGNALGAMTAMLDDILDVSRLDAGNIEVMARSCPVQTMIASLCAEFAPLAEA 1269

Query: 882  QGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDN 941
              +    V + L V SDPKLL R+++NF+ NA +Y   G +++G RR A   +RI VWD 
Sbjct: 1270 AELSLHSVRTGLTVRSDPKLLERILRNFIANAIKYTDQGHILMGCRR-AGPNLRIQVWDT 1328

Query: 942  GIGIEQDKQQEIFEEFNRGGQVRSD--QGLGLGLAISKGIAHVLGHHISMRSWPGQGSVF 999
            G GI  ++   IFEEF++      D  QGLGLGLAI + +A +L H I ++S PG+GS+F
Sbjct: 1329 GRGIPPNQLASIFEEFHQVDNPERDRRQGLGLGLAIVERLATLLQHPIQVQSTPGRGSMF 1388

Query: 1000 SITLDRAQPM-PSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKT 1058
             I +  A P  P    +  A+ +    E    RV+ +D++P +L G+   L   G +V  
Sbjct: 1389 EILVPLASPEDPVPKEEETAIPDGGNGE----RVVVIDDDPAVLDGVAAFLHELGYDVVA 1444

Query: 1059 ATDIHGSLKALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDI 1118
            A+D   +++ LE +  PD++++D+RL    TG E +++          G++++ D +P  
Sbjct: 1445 ASDGDIAVERLESR-APDLVIADFRLRGTETGSEAIRRLERHFATRLPGILLTGDTSPAR 1503

Query: 1119 LDGIESSGFRFMAKPIKP 1136
            +    +SGF  + KP+ P
Sbjct: 1504 IREASASGFLLLHKPLSP 1521