Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 610 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  350 bits (898), Expect = e-100
 Identities = 217/590 (36%), Positives = 336/590 (56%), Gaps = 23/590 (3%)

Query: 571  QQASSALIRHTERVL---AGVFGASSAKLVLTSALQGRKMQLEEVATIVDE-------AS 620
            Q+ +  L+   ER +    G F      +VL   ++ R ++LE     +++       A 
Sbjct: 28   QRINKVLMDRVERSMDFQGGAFSLFQTAIVLEQKIRERTLELERALHKLEDSNRDLARAK 87

Query: 621  ELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRH 680
            EL D  R  L  AIE + +G A+ D   RLV  N++YL  +    G IQ G    D++  
Sbjct: 88   ELADTMRTRLFEAIESVNEGFALFDSADRLVLCNRKYLSYWPSVAGRIQAGIRFNDLVAM 147

Query: 681  NAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDI 740
             A  G      P+  +R R+ H         +R+ +DGR I+V       GG V  +TDI
Sbjct: 148  VAAAGAVAEPPPDVWLRERMEHRHDLKGVFLNRL-SDGRWIQVNERRTRDGGIVGVYTDI 206

Query: 741  TVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDL 800
            TV +  E+  + A+E  E+  L        LN QL  A  ++++ + SK+RF+AA SHDL
Sbjct: 207  TVIKREEER-RRASEQAEKSALMM------LNDQLQQAKSQADQANLSKTRFIAAASHDL 259

Query: 801  MQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPH 860
            +QPLNAARLF S+L+++ + A   +L  +I+ AL + EDL+S LLDIS+L++G +     
Sbjct: 260  LQPLNAARLFVSALADLEQPAANAELVDNIDLALASVEDLLSALLDISKLDAGAVTPEVT 319

Query: 861  SFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNG 920
             F +  VL+ L  E++A+AA++G+   +V S   V SD +LLRR++QNFL+NA RY   G
Sbjct: 320  DFPLRGVLAPLATEYAAVAAERGIDLKVVGSGAVVRSDMRLLRRIVQNFLSNALRYVQGG 379

Query: 921  KVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRS---DQGLGLGLAISK 977
            +V++G RR   G +RI+VWDNG GI +DK  EIF+EF R     +   D+G+GLGLAI  
Sbjct: 380  RVVVGCRRTGDGGIRIEVWDNGPGIPRDKIAEIFQEFRRLDTPVTKGRDRGMGLGLAIVD 439

Query: 978  GIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDN 1037
             +A +L H I++RS PG+GSVF++T+ R     +    ++A      + L    VL +DN
Sbjct: 440  RVARMLDHPITVRSEPGRGSVFAVTVPRGTERRAVRPASIA-ARPMTNRLAGTSVLVLDN 498

Query: 1038 EPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQ-WIPDVILSDYRLDNGRTGLEVLQQ 1096
            EP ++ GM  LL  W C+V +AT+   +L  L G    PD++++DY LD+G  G+  + +
Sbjct: 499  EPAVVAGMEALLRGWACDVVSATNGDEALALLSGMPQPPDLLIADYHLDDGALGVNEVAR 558

Query: 1097 CRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSL 1146
             R   G     VI++A+R P++ D  +++G   + KP+KP +LRA+++ L
Sbjct: 559  LRAACGRILPAVIVTANRTPELADEAKAAGCLVLNKPVKPAQLRAVMSGL 608