Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1544 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  219 bits (559), Expect = 1e-60
 Identities = 164/519 (31%), Positives = 265/519 (51%), Gaps = 43/519 (8%)

Query: 627  RGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGL 686
            R   Q  ++ + + + V+D+ LR+V  +  +   F   P  + +G  +A+        GL
Sbjct: 1039 RDFAQAIVDTVREPLLVLDEMLRVVGASAAFHRSFATTPDGV-LGVQLAETAG-----GL 1092

Query: 687  CGPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVIEV------QGNPMPGG-GFVMSFTD 739
                DPE  +RR +            RV  DG VIE       QG    G  G      +
Sbjct: 1093 LA--DPE--LRRAL-----------ERVIPDGTVIEALELTIGQGVGDQGAEGRRTLLLN 1137

Query: 740  ITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHD 799
                 +A + + +A E + E+V        ++ + L  A   +E  S SK+RFLAA SHD
Sbjct: 1138 ARRLNQAGRLILLAMEDVTEQV--------RVREALAAAKAAAELASASKTRFLAAASHD 1189

Query: 800  LMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHP 859
            L QP+ A  +F   ++   +     KL   + +ALGA   ++ D+LD+SRL++G I +  
Sbjct: 1190 LRQPVQALLMFHHLVAMQPQGEAAAKLLVSMGNALGAMTAMLDDILDVSRLDAGIIQVML 1249

Query: 860  HSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPN 919
             S  +  ++  L AE S LA    ++   V + L V SDPKLL R+++NF+ NA +Y   
Sbjct: 1250 RSCPVQTMIDALCAELSPLAEAAELKLHSVRTSLSVRSDPKLLERILRNFIANAIKYTDQ 1309

Query: 920  GKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSD--QGLGLGLAISK 977
            G++++G RR     +RI VWD G GI  ++   IFEEF++      D  QGLGLGL+I +
Sbjct: 1310 GRILVGCRRAGL-NLRIQVWDTGRGIPSNQLASIFEEFHQVDNPERDRRQGLGLGLSIVE 1368

Query: 978  GIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDN 1037
             +A +L H I ++S PGQGS+F I +  A P   SL +   MV   G   +  RV+ +D+
Sbjct: 1369 RLAALLHHPIRVQSAPGQGSMFEILVPLAGP-DDSLPKDEEMVVSDGGNGE--RVVVIDD 1425

Query: 1038 EPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIPDVILSDYRLDNGRTGLEVLQQC 1097
            +P +L G+   L   G +V  A+D   +++ L G  +PD++++D+RL    TG E +++ 
Sbjct: 1426 DPTVLDGVASFLHELGYDVVAASDGDTAVERL-GSRVPDLVIADFRLKGTETGSEAIRRL 1484

Query: 1098 RLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKP 1136
                     G++++ D +P  +    +SGF  + KP+ P
Sbjct: 1485 ERHFAARLPGILLTGDTSPARIREASASGFLLLHKPLSP 1523