Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 843 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  236 bits (602), Expect = 6e-66
 Identities = 136/376 (36%), Positives = 213/376 (56%), Gaps = 7/376 (1%)

Query: 767  ELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKL 826
            E ++    L  A + ++R + +KS+FLAA SHDL QP+ +  L    LS    +   + +
Sbjct: 455  EHKRAQAALTDARREADRANVAKSKFLAAASHDLRQPVQSLMLLMEVLSSRVSDPMTRNV 514

Query: 827  AHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQF 886
               +E ALGA + L+  LLD+SRLE+G +      FA+ +V+  + A    +A ++G+  
Sbjct: 515  LGTMERALGALKMLLDGLLDVSRLEAGAVVPEVEVFALAEVMDRVAANSRPVAVQKGLLL 574

Query: 887  SLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIE 946
             +VPS + V SDP LL R++QN + NA RY   G++++G RR     +RI+VWD GIGI 
Sbjct: 575  HIVPSGVHVRSDPMLLGRILQNLVENALRYTDKGRILIGCRR-RGHMLRIEVWDTGIGIP 633

Query: 947  QDKQQEIFEEFNRGGQV--RSDQGLGLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLD 1004
             D+Q++IF+EF + G      DQGLGLGLA+ + ++ +LGH +++RS PG+GSVF++ L 
Sbjct: 634  ADQQEDIFQEFVQIGNASRNRDQGLGLGLAVVRRLSVMLGHQVTVRSTPGEGSVFAVELP 693

Query: 1005 RAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHG 1064
             A P  +      A+            VL ++++  +  G+R +L  WG  V  A     
Sbjct: 694  VADPPAAK----PALAPCSPRPAFATTVLVIEDDMIVREGLRAMLAEWGYGVMAAESCAE 749

Query: 1065 SLKALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIES 1124
            +L        PD+I++DYRL +GRTG E +++ RL LG    G++++ D  P      E+
Sbjct: 750  ALDLANRGPAPDLIVADYRLRDGRTGTEAIREVRLALGRILPGILVTGDTAPARAQEAEA 809

Query: 1125 SGFRFMAKPIKPLKLR 1140
              FR M KP+    LR
Sbjct: 810  GNFRVMHKPVIAADLR 825