Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1147 a.a., Aerobic respiration control sensor protein ArcB from Alteromonas macleodii MIT1002

 Score =  715 bits (1846), Expect = 0.0
 Identities = 429/1176 (36%), Positives = 674/1176 (57%), Gaps = 72/1176 (6%)

Query: 3    GWLVIPVSLAYLGVLFLIAWYGDRQ--TRWLANWRPWIYSLSIAVYCTSWTFYGTVGQAS 60
            GW+ + V   YL +LF +A +G++   T       P IYSL++A+YCT+WTF+G VGQAS
Sbjct: 4    GWVTLAV--LYLFLLFSLASWGEKNSPTARALTSHPAIYSLALAIYCTAWTFFGMVGQAS 61

Query: 61   VNPWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTVI 120
             + W +LPI + PIL++V G++ + +L L++K++HIT+++DFI +RYGK Q +A+ VT+I
Sbjct: 62   RDTWIYLPIMLGPILVYVLGYKFIYKLTLVSKKQHITTISDFIVSRYGKRQTVALVVTLI 121

Query: 121  AVLGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLA---LALFTMLFGTRH 177
            A+L  +PYIALQL+ +     ++          Q+ + +  ++ A   +A+F + FGTR 
Sbjct: 122  ALLATIPYIALQLKAVGATFQLLT---------QQPNSNGIIIAATGFIAVFAIYFGTRQ 172

Query: 178  IDNTEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLAW-RTDG---LELSTIAASTYQAPN 233
             D TE+ RG+M+AIAFES +KL+A + V + + Y AW RT      E  T   +  Q  +
Sbjct: 173  TDVTEYRRGLMLAIAFESTIKLLALVLVAI-VGYSAWKRTQSGAFFESFTNEVALAQFGS 231

Query: 234  WPTLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTG 293
            + + +  T++   AIVCLPRQFH  +++N     L TARWLFP+YL ++S  +  IA  G
Sbjct: 232  F-SFIAQTIMAAAAIVCLPRQFHVAIIDNLSLGHLRTARWLFPLYLTIISAVIPVIAIAG 290

Query: 294  QGLLPNTS--PDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVM 351
            + +       PD++V+SL +F+ +  + ++ F+GG SAA+ M+IV+T+ L+ M++ND+++
Sbjct: 291  KAIFAGQGIEPDSYVLSLAMFSESALLQVIVFVGGLSAATAMIIVATLTLSTMLTNDVIL 350

Query: 352  PLLLRRMRLSQRTH--RHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFS 409
            P +L     S  T   +  S  + +IRR +I  +L  A+ ++  + S  SL +IG ++FS
Sbjct: 351  PRILA---FSGNTDDKKDVSKRIRLIRRIVIAFILLMAFLYHQQMTSSRSLHSIGLIAFS 407

Query: 410  AITQFAPAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMS--ATDMLAGDASNNVLLWVI 467
             + Q  PAI GG+YW+  +  GVY GL VG  +W++ L+    ++ ++    N ++    
Sbjct: 408  LVIQLMPAIVGGLYWKRAHAHGVYAGLMVGLVIWVLWLVLPIVSEQVSQMEQNELI---- 463

Query: 468  TPPDWLVALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVGTPLPENENM 527
                            G ++S+  N+L YI  S      L +R+QA AFV   +     +
Sbjct: 464  --------------SQGAMISLAANSLVYILFSHFAPQRLIDRMQAEAFVSPAISGTNTV 509

Query: 528  SLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALIRHTERVLAG 587
                + VTV +L  L S F+G  R      QY       L        + +   ER L G
Sbjct: 510  KSQATNVTVSDLITLLSTFMGTGRCDQLLTQYQQLNNCQLNHTDTPDESFLSFCERALGG 569

Query: 588  VFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQ 647
            V GASSAK++L SAL+G+KM   EV    D+ ++   F+   L  ++E++ QGI+VVDK 
Sbjct: 570  VIGASSAKVLLDSALRGKKMDFTEVINFFDDTTQAMQFNMTALLTSLENMDQGISVVDKH 629

Query: 648  LRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGT 707
            L LVAWN+RY  L+ +P  L+ VG PI  +IR+NA QG  G  D +  V +R+ HL  G 
Sbjct: 630  LNLVAWNKRYANLYPYPDNLLAVGTPIEKLIRYNASQGEFGTHDVDAEVEKRLAHLRSGM 689

Query: 708  SHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLE 767
             H  +R R DGRVIE+ GNP+PGGGFV SF DIT   E +Q+L+ +N  LE R+ +RT E
Sbjct: 690  PHRFTRQRKDGRVIEMVGNPLPGGGFVTSFNDITGHVEIQQALEESNIDLEARIKKRTEE 749

Query: 768  LEKLN--------------KQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASS 813
            +  +N              K+L+ A + +E  + SK+RFLA  SHD++QPLNAA+L+ S+
Sbjct: 750  VHSINAELRLEIERRSEAEKELIRARKAAEDANASKTRFLALASHDVLQPLNAAKLYVSA 809

Query: 814  LSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNA 873
            L E     + Q +   +  ++ ++E LI  LLDI+RL+ G++     S  +  +LS L  
Sbjct: 810  LEEQELSDQAQAIIQKLGHSVTSSETLIGTLLDIARLDQGEMKPDIESIDVRVLLSPLVD 869

Query: 874  EFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQ 933
            E +  A ++G+ F  +    WV +D   L R+ QN L+NA +Y   G+V+  V+ V    
Sbjct: 870  EMAMRAREKGLAFKAIIRPCWVKADKTYLYRITQNLLSNAVKYTEMGRVLFVVKPVKE-T 928

Query: 934  VRIDVWDNGIGIEQDKQQEIFEEFNRGGQVRSDQGLGLGLAISKGIAHVLGHHISMRSWP 993
            V   V D GIGI  DK+  IF +F R  + + + GLGLGL + + ++  L   IS+ S  
Sbjct: 929  VYFKVIDTGIGISNDKKDSIFGDFFRANESK-EHGLGLGLGVVRRLSLQLNSDISVNSKV 987

Query: 994  GQGSVFSITLDRAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWG 1053
            G+GS FS +L +A+P    L   V +   + +    + VLCVD++ + L  M+ LL++W 
Sbjct: 988  GKGSCFSFSLTKAEP---KLVSNV-IAKPRSTTFTGMNVLCVDDQRENLDAMQTLLQKWR 1043

Query: 1054 CEVKTATDIHGSLKALEGQWIPDVILSDYRL--DNGRTGLEVLQQCRLRLGDCFAGVIIS 1111
              V  A +   +LK  E    P ++L DY+L  D+ + GL ++++ R RL       +I+
Sbjct: 1044 VNVFLANNWDDALKVCE-VIQPQILLMDYQLSHDSEKNGLALIEEIRHRLNIVVPAALIT 1102

Query: 1112 ADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSLS 1147
            A  +  ++   ++ G  F+AKP+KP KLRALL S++
Sbjct: 1103 ATPDESLVTQCKAQGVNFLAKPLKPAKLRALLQSMT 1138