Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 837 a.a., Sensor protein EvgS precursor from Alteromonas macleodii MIT1002

 Score =  179 bits (454), Expect = 8e-49
 Identities = 125/419 (29%), Positives = 214/419 (51%), Gaps = 15/419 (3%)

Query: 731  GGFVMSFTDITVFREAEQSLKMANETLEERVLQRTLELEKLNKQLVTATQRSERESQSKS 790
            G FV++ TD++   E++  LK A + LE  V +RT EL   N  L  A         SKS
Sbjct: 426  GHFVLA-TDVSQQVESQLQLKAAKDQLESNVEKRTRELNHANIALQEAID-------SKS 477

Query: 791  RFLAAVSHDLMQPLNAARLFASSLSEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRL 850
            +FLAA+SHDLMQPL+AA LF  +L +   ++    +   ++++L     LI  L++ S+L
Sbjct: 478  KFLAAISHDLMQPLSAAILFNETLKDQV-DSSSSPIVTALDNSLSDLHGLIRTLIETSKL 536

Query: 851  ESGKIDLHPHSFAIMDVLSNLNAEFSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFL 910
            ++G +        ++ +L  L  EF+ ++    V F       +V +D  LL R+++N L
Sbjct: 537  DAGVLQPDKQQENVLPLLMQLAEEFTHISKDYSVDFRYRLKEAFVVTDVNLLSRILRNLL 596

Query: 911  TNAFRYNPNGKVILGVRRVATGQVRIDVWDNGIGIEQDKQQEIFEEFNR-GGQVRSDQGL 969
             NA +Y  NGKV+L  R+V    + I ++D G+GI +D Q+ IF+EF+           L
Sbjct: 597  INAMKYGANGKVLLAARKV-NENLEISIYDQGVGISEDDQKVIFKEFSSLENDFNYSYSL 655

Query: 970  GLGLAISKGIAHVLGHHISMRSWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEKG--SEL 1027
            GLGL I   ++ +L H I +RS  G G+ F++T+   +   +S  Q      E      +
Sbjct: 656  GLGLYIVDKMSKLLEHDIRVRSKEGVGACFTVTIPITEVCDTSQEQDYLYTLEPSLPDYV 715

Query: 1028 QHLRVLCVDNEPDILVGMRDLLERWGCEVKTATDIHGSLKALEGQWIP-DVILSDYRLDN 1086
                +  +DN+ ++ + M+ L   W  EV T +          G +   D+++ DY LD 
Sbjct: 716  LDKHIWHIDNDANMRIAMQTLFANWDMEVDTFSGFEQCSAVNNGSFDECDMLIVDYHLDE 775

Query: 1087 GRTGLEVLQQCRLRLGDCFAGVIISADRNPDILDGIESSGFRFMAKPIKPLKLRALLNS 1145
              TGL++ ++ R ++      +I +A+ +  + + +E +  + + KP+    L+A L S
Sbjct: 776  EETGLDIAKRVR-KIAPSMPIMICTANHSKALANELEGTDIQLLHKPVNSSVLKAALVS 833



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 36/168 (21%), Positives = 68/168 (40%), Gaps = 17/168 (10%)

Query: 599 TSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIGQGIAVVDKQLRLVAWNQRYL 658
           T  LQ    +LE+    +  A E     +  L  AIE   Q + ++D+   ++ +N+ + 
Sbjct: 65  TEELQSVLQKLEQSNAELVRAHEETHQVKQRLHDAIESTNQAMVLLDRLGGIIFFNRHFE 124

Query: 659 ELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRRRVYHLEQGTSHTSSRVRADG 718
            +++      ++G    D+ +     G+     P D   R +Y L            ++ 
Sbjct: 125 TVWDDLSITPKIGDNYYDITQAAKHSGVIRRALPADVEGRMIYQL------------SNR 172

Query: 719 RVIEVQGNPMPGGGFVMSFTDITVFR-----EAEQSLKMANETLEERV 761
           R  ++   P   GG V+ F DIT  +       EQ +K  N+ L+  +
Sbjct: 173 RWYQLTNRPTQEGGNVILFNDITEVKLLESNRYEQVIKEKNKLLQSLI 220



 Score = 32.7 bits (73), Expect = 1e-04
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 19/124 (15%)

Query: 629 LLQGAIEHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGL-C 687
           LLQ  I++I  GI ++DK+  +  WN  +L     P  ++   + I  +  +    GL  
Sbjct: 215 LLQSLIDNIDVGILLIDKEGGIAFWNNTFLTQSNVPQHVLVNSKNIYALQNNRHWSGLNL 274

Query: 688 GPGDPEDHVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAE 747
            P  P                  S+++  +  V+E     +P G  + +FT++T      
Sbjct: 275 KPVGP------------------STQIIHEQLVVERNITTLPDGNTLCTFTNVTSQHHYA 316

Query: 748 QSLK 751
           ++LK
Sbjct: 317 ETLK 320