Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1169 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58

 Score =  749 bits (1933), Expect = 0.0
 Identities = 445/1177 (37%), Positives = 694/1177 (58%), Gaps = 47/1177 (3%)

Query: 1    MQGWLVIPVSLAYLGVLFLIAWYGDRQTRWL---ANWRPWIYSLSIAVYCTSWTFYGTVG 57
            + GW++   + AY+ +LF +A YGDR++R        RP++Y+LS+A+YCTSWT++G VG
Sbjct: 2    LPGWIIFGSAFAYILLLFAVASYGDRKSRDRHAPKKGRPFVYALSLAIYCTSWTYFGGVG 61

Query: 58   QASVNPWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAV 117
             A+     FL IY  PIL F  G  ++ R++ +AK E +TS+ADFIAARYGK+  +A+ V
Sbjct: 62   LAADKGLEFLGIYTGPILAFTLGMPIIRRIVDLAKTEKLTSVADFIAARYGKNSTVAMIV 121

Query: 118  TVIAVLGILPYIALQLRGITMGL-NIVAPDLMTVYGYQESHVSWF-----VVLALALFTM 171
             +IA++G +PYIALQL+ ++  +  +V P     YG    ++ +      V L +A F +
Sbjct: 122  AIIALVGAIPYIALQLKAVSSSVATMVDPG---DYGIGSGNLYFLDLPLVVTLVMAGFAV 178

Query: 172  LFGTRHIDNTEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLA-------WRTDGLELSTI 224
            +FGTRH D TEH  G+++AI+ ES+VKLVA   VG ++ ++        W+        +
Sbjct: 179  MFGTRHTDATEHQDGLILAISMESLVKLVAMCTVGFYVLFVLFDGPAHLWQLATDNEQAM 238

Query: 225  AASTYQAP--NWPTLLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLM 282
             A +Y  P   W   ++ TLL+  AI+ LPRQFH  VVEN  P++L  A +L P+YL+ +
Sbjct: 239  RAISYHTPISRW---IVMTLLSGFAIILLPRQFHVTVVENRTPEELRMAGFLLPLYLIAI 295

Query: 283  SLFVLPIAWTGQGLL-PNTSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIAL 341
            ++FVLPIA  G   L  N   D +V+ LP+      ++L+ F+GG SAA+ MVIV+++AL
Sbjct: 296  NIFVLPIALAGILTLGANGDADLYVLQLPLNHQMPVVSLITFIGGFSAATAMVIVASVAL 355

Query: 342  AIMVSNDLVMPLLLRRMRLSQRTHRH-FSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSL 400
            +IM+SND+VMP+ LR+  L++  HR  F+  L+ IRRT I  ++   +G+Y   DS   L
Sbjct: 356  SIMISNDIVMPIFLRQKLLNRSPHRDDFAKTLLNIRRTAIFAVMLLGYGYYRAADSATGL 415

Query: 401  SAIGFLSFSAITQFAPAIFGGMYWREGNRKGVYVGLAVGFTLW--LITLMSATDMLAGDA 458
            ++IG L+F+AI Q APA+FGG++WR  N +G   GL+ GF +W  L+ L S       + 
Sbjct: 416  ASIGLLAFAAIAQMAPALFGGLFWRRANARGAIAGLSSGFFVWAYLLFLPSFGGPDNSEV 475

Query: 459  SNNVLLWVITPPDWLVALGLKSADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFVG 518
            + N+L ++ +                ++LS+ +N+L ++  SL       ER+Q+  FV 
Sbjct: 476  AANILGFLFSGSTVFNGPEADPFVNAVILSLLVNSLAFVLGSLSRNPRPVERIQSGIFVK 535

Query: 519  TPLPENENMSLYQSRVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQASSALI 578
                       +++RV+VG+L+   +R++G  R+  + A Y       L  +Q A  ALI
Sbjct: 536  RHSKSQFATRGWKTRVSVGDLKSAIARYLGEERMLRSLATYEKTAGRKLNDDQPADMALI 595

Query: 579  RHTERVLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAIEHIG 638
              +E++L    G+SSA+LVL+  LQ  +    + A ++D+ASE   +++ +LQ A+  + 
Sbjct: 596  HFSEQLLGSAIGSSSARLVLSIILQKAEDTSADTAWLLDQASEALQYNQDMLQTALAQMD 655

Query: 639  QGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPEDHVRR 698
            QGIAV D   +L  WN+R+  L + P    QVG P+ +++    ++G   PGD ++ +  
Sbjct: 656  QGIAVFDSSQQLTIWNRRFRTLLDLPEQFGQVGVPLTEIVTMLQERGDMPPGDTDELITS 715

Query: 699  RVYHLEQGTSHTSSRVRADG-RVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMANETL 757
             +           S V A G R+IEV+ N MP  G V +FTDIT    ++Q+LK ANETL
Sbjct: 716  FLT-----MDLPFSLVLAGGERIIEVRSNTMPDKGIVATFTDITQRVASDQALKQANETL 770

Query: 758  EERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSLSEV 817
            E+RV +RT+EL ++N+ L  A   ++  +  K+RF AA  HD++QPLNAARL++SSL E 
Sbjct: 771  EQRVEERTVELTRVNRALAEARASADEANIGKTRFFAAAGHDILQPLNAARLYSSSLVER 830

Query: 818  AKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAEFSA 877
               +    L H+I+SAL + E ++  +LDISRL++G +     S  + ++L  +  +F+ 
Sbjct: 831  LGASGESDLVHNIDSALESVETILGAVLDISRLDTGSMKARMTSVPLNELLKRIETDFAP 890

Query: 878  LAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVATGQVRID 937
            +A ++ +   ++P+ L V SDP LLRR+IQN ++NA +Y   GKV++G RR   G+V I 
Sbjct: 891  MAQEKNLDLVVMPTSLTVRSDPNLLRRLIQNLVSNAIKYTLEGKVVVGARR-RGGEVVIQ 949

Query: 938  VWDNGIGIEQDKQQEIFEEFNRGGQ-VRSDQGLGLGLAISKGIAHVLGHHISMRSWPGQG 996
            V D+GIGI   K + +F+EF R  +  ++  GLGLGL+I   ++ +L H + + S PG+G
Sbjct: 950  VTDSGIGIPASKFRTVFKEFARLDEGAKTASGLGLGLSIVDRLSRMLHHPVQLISTPGKG 1009

Query: 997  SVFSITLDR-AQPMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLERWGCE 1055
            + F I L R A  +  + T+           L  +RVLC+DNEP IL GM  LL  WGC+
Sbjct: 1010 TTFRIHLPREADRLAPAKTEGGTTSPAASDRLHGIRVLCIDNEPKILEGMTLLLTGWGCD 1069

Query: 1056 VKTATDIHGSLKALEGQWI-----PDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVII 1110
            V  A    GS+ ALE  ++     PDVI++DY LD+G  G+  ++  R   G     +++
Sbjct: 1070 VLPA----GSVAALEEPFLTLAAAPDVIIADYHLDDG-DGISAIRLIRTFYGKTIPALLV 1124

Query: 1111 SADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSLS 1147
            +ADR+P++    E  G     KP+KP  LRA +N +S
Sbjct: 1125 TADRSPEVRSDAEKYGISVQHKPVKPAALRAYINQIS 1161