Pairwise Alignments

Query, 1147 a.a., hybrid sensor histidine kinase/response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 1165 a.a., Sensor histidine kinase RcsC from Acinetobacter radioresistens SK82

 Score =  780 bits (2014), Expect = 0.0
 Identities = 457/1176 (38%), Positives = 707/1176 (60%), Gaps = 48/1176 (4%)

Query: 1    MQGWLVIPVSLAYLGVLFLIAWYGDRQ-TRWLANWRPWIYSLSIAVYCTSWTFYGTVGQA 59
            M  WL+I V   Y+ +LF+ A++G++  +R     R  ++SL++ VYC+SWTFYG  G A
Sbjct: 1    MNSWLIIGVLALYIFILFVCAFFGEKHASRLSTRGRMLLFSLTLGVYCSSWTFYGATGAA 60

Query: 60   SVNPWSFLPIYIAPILMFVFGWRVLARLILIAKREHITSLADFIAARYGKSQGLAVAVTV 119
                  FLPIY+ P+L    G+ +  RL  + +   I+S+ADF+AARYGKS  LA  VT+
Sbjct: 61   VREGIIFLPIYLGPLLFVGLGYDIWRRLGRVRQHHAISSIADFVAARYGKSGSLASLVTI 120

Query: 120  IAVLGILPYIALQLRGITMGLNIVAPDLMTVYGYQESHVSWFVVLALALFTMLFGTRHID 179
            +AV+ I+PY+ALQLR I +  +++     +++    S +   +   LA+  M+FGTR I 
Sbjct: 121  LAVIAIIPYLALQLRAIALSASVILTQNESLHTTTNSVL--LLTGVLAILAMMFGTRQIA 178

Query: 180  NTEHHRGMMMAIAFESIVKLVAFLCVGVFIAYLAWRTDGLELSTIAASTYQAPNW---PT 236
            NTE H G+M+A+AFES VKL A LCV +F  + A          +A + Y+   +    T
Sbjct: 179  NTEQHGGLMLAVAFESFVKLFALLCVALFFLFDAPENIVQVSGDVAKTFYEVQLFGVPET 238

Query: 237  LLIHTLLTMIAIVCLPRQFHTMVVENERPQDLHTARWLFPVYLLLMSLFVLPIAWTGQGL 296
              + TLL  +AI+CLPRQFH  VVE    + +  AR  F  YL+L +L ++PIA      
Sbjct: 239  FWVQTLLAALAIICLPRQFHVAVVELRDEKHIRGARRWFAAYLILTTLAIIPIASWALHA 298

Query: 297  LPN--TSPDTFVISLPVFAGAHDIALLAFLGGTSAASGMVIVSTIALAIMVSNDLVMPLL 354
             PN  T PD  V+SLP+      + LLAFLGG SA++GM++VS++AL+IM+SNDL+MP L
Sbjct: 299  APNFLTVPDVAVLSLPLSYNQEWLTLLAFLGGFSASTGMLLVSSVALSIMLSNDLIMPAL 358

Query: 355  LRRMRLSQRTHRHFSGLLVVIRRTLILLLLFGAWGFYLVLDSIPSLSAIGFLSFSAITQF 414
             R   +  R  +    +L   RR  IL ++   + F+   + I  LS  G L+FSA+ QF
Sbjct: 359  WR-FNIISRHDKRLPQVLKFTRRVCILGVMLLGFLFFHFFNDIDQLSVFGLLAFSAVAQF 417

Query: 415  APAIFGGMYWREGNRKGVYVGLAVGFTLWLITLMSATDM--LAGDASNNVLLWVITPP-- 470
            +PA+ GG+YWR G+R+GVY GL VGF +W  TL+  T +  L    +     ++   P  
Sbjct: 418  SPALIGGLYWRGGSRQGVYAGLIVGFFMWTYTLLLPTILRSLPESYTEFAQQFLTAGPLG 477

Query: 471  -DWL---VALGLKS---ADWGMLLSVTLNTLCYIGVSLVTRASLSERLQAAAFV---GTP 520
              WL     LG +S      G++ ++ LN + YI VS + R S++E++QA +F      P
Sbjct: 478  LHWLRPEALLGFESFAPLTHGVIWALGLNIILYIWVSRIYRPSIAEQIQAESFFYYETKP 537

Query: 521  LPENE---NMS-LYQS--RVTVGELEMLASRFVGRTRVRNAFAQYWSQQRETLLPNQQAS 574
            LP +    +MS L+Q   R+ VG+L  LA R  G     +AF Q+ +Q    L  N  A+
Sbjct: 538  LPAHSASTDMSYLHQDAVRLKVGDLMTLARRITGEGPATHAFQQFCAQNNLVLNENSVAN 597

Query: 575  SALIRHTERVLAGVFGASSAKLVLTSALQGRKMQLEEVATIVDEASELYDFSRGLLQGAI 634
                R TE+ LAG  GA+SA+ +LT+A+    + L +VA I+D+AS+   F++ LL   I
Sbjct: 598  GMWWRFTEQYLAGTIGAASARTLLTTAMVNNGLALGQVANILDQASQWQRFNQNLLMTMI 657

Query: 635  EHIGQGIAVVDKQLRLVAWNQRYLELFEFPPGLIQVGRPIADVIRHNAQQGLCGPGDPED 694
            +H+ QG++VVD+ + LVAWN +YL+LF++P  L+ VG PI+D+IR+NA++G CGPG  E+
Sbjct: 658  DHMTQGVSVVDENMCLVAWNNQYLKLFDYPKDLVYVGCPISDLIRYNAERGECGPGSIEE 717

Query: 695  HVRRRVYHLEQGTSHTSSRVRADGRVIEVQGNPMPGGGFVMSFTDITVFREAEQSLKMAN 754
            HVR+R++ ++ G++H   R+R DGRVI+++GNP+ GGGFV +F DIT FRE E       
Sbjct: 718  HVRKRIHWMQVGSAHEFERIRKDGRVIQMRGNPIEGGGFVTTFADITAFRENE------- 770

Query: 755  ETLEERVLQRTLELEKLNKQLVTATQRSERESQSKSRFLAAVSHDLMQPLNAARLFASSL 814
              LE RV+ RT +L     +   A +++++ + SKSRF+AA SHDL+QP++AARLF+++L
Sbjct: 771  AILEARVIDRTRQLADALAEQQLAREQADKANMSKSRFIAAASHDLLQPMHAARLFSTAL 830

Query: 815  SEVAKEAEVQKLAHHIESALGAAEDLISDLLDISRLESGKIDLHPHSFAIMDVLSNLNAE 874
             +     E +     ++ AL  AE ++S LLDI+RLE G +  +  S+ + D+L +L  +
Sbjct: 831  EQSVNNDEDRTTLQQLDRALHGAESMLSALLDIARLEGGNMQPNRQSYPLHDLLRDLELQ 890

Query: 875  FSALAAKQGVQFSLVPSLLWVHSDPKLLRRVIQNFLTNAFRYNPNGKVILGVRRVA--TG 932
            F ++A+++ +QF +  +  W+ +DP+ +RR++QNF++NA RY   G+V+LGV R +   G
Sbjct: 891  FKSIASQRNIQFHVHDAPFWIDTDPQWIRRIVQNFVSNALRYTAKGRVLLGVLRSSERPG 950

Query: 933  QVRIDVWDNGIGIEQDKQQEIFEEFNRGGQVR--SDQGLGLGLAISKGIAHVLGHHISMR 990
             +RI VWD G GI ++++ ++F+EF R G      +QGLGLGLAI + +  +L + + + 
Sbjct: 951  HIRIGVWDTGPGIAEEQRIKLFQEFERCGHTSPWGEQGLGLGLAIVQRMTSLLDYPVHVY 1010

Query: 991  SWPGQGSVFSITLDRAQPMPSSLTQTVAMVNEKGSELQHLRVLCVDNEPDILVGMRDLLE 1050
            S  G+GS F + +    P P ++T  V +   K    +  R+LC+DN+  IL GM  LL 
Sbjct: 1011 STQGKGSCFILEVPIVAP-PKTVTAPVQVAPLK---TKAYRILCLDNDETILEGMSTLLT 1066

Query: 1051 RWGCEVKTATDIHGSLKALEGQWIPDVILSDYRLDNGRTGLEVLQQCRLRLGDCFAGVII 1110
            +WG +V  A +   ++  +E + I  V L D  L+ G+ GL+ + + R          +I
Sbjct: 1067 KWGYQVFKAREPQQAIALIEQENI-QVWLIDQHLNQGQLGLDFILEHR---HHPVPVALI 1122

Query: 1111 SADRNPDILDGIESSGFRFMAKPIKPLKLRALLNSL 1146
            +AD +P++   ++      + KP+KP  LRA L+ L
Sbjct: 1123 TADSDPELPHRLKQHNIVLLKKPLKPAALRAWLSGL 1158