Pairwise Alignments

Query, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  230 bits (586), Expect = 2e-64
 Identities = 157/620 (25%), Positives = 292/620 (47%), Gaps = 25/620 (4%)

Query: 4   KFNMQSPPFNRLTAEQQHQLRSALDVAYFRQRDVLIDAQHPVTHLHILIKGTVEERSPDG 63
           +F  Q PPF+ L  E+  ++   +++AYFR+   +I  +  ++ L+++  G VE     G
Sbjct: 18  QFLQQHPPFDALPNERLPEIAQQIEIAYFRKDTPIIGYKQAISDLYLVRSGAVEVYRRHG 77

Query: 64  KEVFAHYANDDLFDVRAMFEELSKHQYM----ALEDTLSYLLPKSIFLQLYEQNGEFAAY 119
            E++       LF    +   L+++Q      A+EDTL Y LP+++F +L+++   FA +
Sbjct: 78  -ELYNRLTEGSLFGQMGL---LTRNQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADF 133

Query: 120 FDNNLAKRQELIEAAAQQKNIAEFILTKVDRSIYHPPFILSPEQPIHSVTQQLKERGIDA 179
            +   A R  L +  A+QK   + I +KV + +      +  +  I    Q++ +  + A
Sbjct: 134 VEVEQAVR--LRQTVAKQKEQNDLITSKVKQLLTRSAPTIDKQASIQQAAQRMADENVSA 191

Query: 180 ALVELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLHVDEGDFL 239
            L+  +        +      IVT  ++   V+ +G  +   V ++ T  V+ +D   ++
Sbjct: 192 LLILDNQILLDTEDDSTPMVGIVTERDLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYV 251

Query: 240 FNAMVMMTRQRIKRVMVCLGNQAVGLLSLIQILSAFSTHSHVLTLAIARAASIDELALAA 299
           + AM+ M R  +  + V    Q +G++ +  I+   S +S +L   I +   ID+LA  A
Sbjct: 252 YEAMLAMLRNNVHHLPVLRERQPIGIIDMTDIVRHESQNSLLLVSRIYQQTCIDDLAQLA 311

Query: 300 NKQRELVESLMSRGVRTRFVMELIAAVNEQIIEKAFELVVPP--ALHDQCCLVVLGSEGR 357
           N+ +     L++    +  +   ++ +     ++  ELV     A     C V  GS GR
Sbjct: 312 NEVKASFVRLVNEDANSHMIGTAMSTIGRAFTQRIIELVEAELGAAPLPYCFVAFGSMGR 371

Query: 358 GEQILKTDQDNALIIQDGLEWHQ----CQPIMETLTHTLLQLGYPLCPGKVMVNNPKWVR 413
            EQ++ TDQDNALI+ D  +  Q         E +   L + GYPLC G++M +NPKW  
Sbjct: 372 DEQLIVTDQDNALILDDRYDVQQHGAYFAQFAELVCRGLDRCGYPLCDGEIMASNPKWRM 431

Query: 414 SQSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLAPVKAHLQHLMAGQELILAE 473
           ++ +W+    DW+    P+ +++ +IF D   V G       +   +       +  LA 
Sbjct: 432 TRKEWETCFADWIDNPNPQALLNASIFFDLDGVYGRTKWAEQLSGFIVRRARRNQRFLAC 491

Query: 474 FTRPALNFSVPLTLFGNVKSSKQG-----IDIKQGGIFPIVHGVRALSLEHAIDANNTFD 528
             R ALN + PL  F N    K G     I++K+ G  P+   +R  +L     A N+F+
Sbjct: 492 LARNALNRTPPLGFFKNFVMEKDGRHNNSINLKRRGTAPLADLIRVHALAAGSRAKNSFE 551

Query: 529 RIEALVKKRVLEQETGDNLSEAFKLFLKLRLAQQL----GNQHSTNQLDFKQLDRTERDL 584
           R++ +++  +L Q  G +L +A +    +R+  Q       + + N ++ + L   ER  
Sbjct: 552 RLDDVIEAGLLPQGKGKDLRDALEFIAMVRIRHQAIDVEQEREADNSIEPEHLSDFERRN 611

Query: 585 LRHSLHVVKKFKQWLGYHYQ 604
           L+ +  ++   + +L Y YQ
Sbjct: 612 LKDAFQILSNGQNYLKYRYQ 631