Pairwise Alignments

Query, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 645 a.a., CBS domain protein from Pseudomonas putida KT2440

 Score =  171 bits (433), Expect = 9e-47
 Identities = 150/636 (23%), Positives = 272/636 (42%), Gaps = 48/636 (7%)

Query: 4   KFNMQSPPFNRLTAEQQHQLRSALDVAYFRQRDVLID-AQHPVTHLHILIKGTV----EE 58
           +F  + PPFN++       L     + ++   + ++  A  PV H +I+ +G V    + 
Sbjct: 24  QFLQRFPPFNQMEHSHLAFLVEQCQLRFYACGESIVKPADGPVEHFYIVKQGRVVGERQH 83

Query: 59  RSPDGKEVFAHYANDDLFDVRAMF-EELSKHQYMALEDTLSYLLPKSIFLQLYEQNGEFA 117
            +  G E      + + F + A+  E  ++ +++A EDT    L K+ F++++  +  F 
Sbjct: 84  LAKPGVETTFEITSGECFPLAALLGERATRTEHLAGEDTFCLQLNKAAFIRVFSMSDVFR 143

Query: 118 AYFDNNLAKRQELIEAAAQQKNIAEF-----ILTKVDRSIYHPPFILSPEQPIHSVTQQL 172
            +    ++   + +    +Q+ +        + T +       P + S   P+    + +
Sbjct: 144 DFALRGVSSLLDQVNQQVRQRAVETLGTQYSLNTPLGELAMRHPVVCSAHTPLREAVRLM 203

Query: 173 KERGIDAALVELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLH 232
            E+ + + +V     DP+      +P  I T  ++   V      L   +    T    +
Sbjct: 204 HEQQVGSIVVV----DPQ-----RYPIGIFTLRDLRQVVATVDTDLGAAIDRHMTAKPFY 254

Query: 233 VDEGDFLFNAMVMMTRQRIKRVMVCLGNQAVGLLSLIQILSAFSTHSHVLTLAIARAASI 292
           +      F+A + MT + I  V +    +  G++S   + S        L   I  A  +
Sbjct: 255 LPPQASAFDAAMAMTERHIAHVCLVENGRLCGVVSERDLFSLQRVDLVHLARTIRHAPRL 314

Query: 293 DELALAANKQRELVESLMSRGVRTRFVMELIAAVNEQIIEKAFELVV-----PPALHDQC 347
           D L     +  +LVE +++ G  +  + ++I  +N+  + +  EL +     P       
Sbjct: 315 DTLVSLRGEISQLVERMLAHGASSTQITQIITLLNDHTVCRVIELALAERGDPGVPFSWL 374

Query: 348 CLVVLGSEGRGEQILKTDQDNALIIQ--DGLEWHQCQ----PIMETLTHTLLQLGYPLCP 401
           C    GSEGR EQ L TDQDN ++ +  D  E    +    P+ + +   L Q G+ LC 
Sbjct: 375 CF---GSEGRREQTLHTDQDNGILFEAVDSAEADAIRARLLPLAQYINQCLAQCGFTLCM 431

Query: 402 GKVMVNNPKWVRSQSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLAPVKAHLQ 461
           G VM  NP+   S+S+W R    +V+ A PE ++  +I+ D   V G+      ++  L 
Sbjct: 432 GNVMAGNPELCLSRSEWARRFAGFVREASPENLLGSSIYFDLRVVWGDEQGCEQLRQGLL 491

Query: 462 HLMAGQELILAEFTRPALNFSVP--------LTLFGNVKSSKQGIDIKQGGIFPIVHGVR 513
             +A   +        AL    P        LT  GN K++   +D+K  G+ P V G R
Sbjct: 492 AQVADNRIFQRMMADNALRQRPPVGRLREFVLTRQGNDKAAT--LDLKVQGLTPFVDGAR 549

Query: 514 ALSLEHAIDANNTFDRIEALVKKRVLEQETGDNLSEAFKLFLKLRLAQQ----LGNQHST 569
            L+L + I A NT +R+  LV K V+E   G    EA+    + R+ Q       N   +
Sbjct: 550 LLALANGIAACNTLERLRQLVAKGVIEPLDGAAYEEAYHFIQQTRMQQHQRQIRDNLPYS 609

Query: 570 NQLDFKQLDRTERDLLRHSLHVVKKFKQWLGYHYQI 605
           N+LD   L+  +R +LR SL   ++ +  L   YQ+
Sbjct: 610 NRLDPDSLNHLDRRILRESLRQAQRLQSSLALRYQL 645