Pairwise Alignments

Query, 607 a.a., cyclic nucleotide-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  357 bits (916), Expect = e-103
 Identities = 206/624 (33%), Positives = 333/624 (53%), Gaps = 33/624 (5%)

Query: 2   PDKFNMQSPPFNRLTAEQQHQLRSALDVAYFRQRDVLIDAQHPVTHLHILIKGTVEERSP 61
           PD F+   PPF+ LT +Q+  L  ALD+A + +  VL+  + P   + ++++GTV+ER  
Sbjct: 10  PD-FDFGQPPFDLLTGDQRTALAGALDIALYPRDAVLLSREEPTDAMFVVLRGTVQERR- 67

Query: 62  DGKEVFAHYANDDLFDVRAMFEEL-------SKHQYMALEDTLSYLLPKSIFLQLYEQNG 114
            G EV A +   D F ++A++          S  +++A E+   +L+P+     L  +N 
Sbjct: 68  -GGEVAAVHGPGDRFGLQALYGAAGAGAGGSSARRFVAAEECACHLIPRPALEALSAENP 126

Query: 115 EFAAYFDNNLAKRQELIEAAAQQKNIAEFILTKVDRSIYHPPFILSPEQPIHSVTQQLKE 174
           EF A    + A+R   + A    + +A   + ++ ++  HPP  +     +    + +K+
Sbjct: 127 EFGAAIIGDFAQRMRDLAALRSNREMAALTMARIRQAYLHPPLFVDAAASLRDAAEAMKQ 186

Query: 175 RGIDAALVELHPSDPRLAHNHAHPYAIVTRTNMLHAVMLEGRPLDTPVGEIATFPVLHVD 234
               + LV                  I+T T++   V+L GRP+  PVG +A + +L +D
Sbjct: 187 NCASSVLVR----------GADGTVGILTGTDLRDLVVLAGRPVSEPVGPLARYGLLTLD 236

Query: 235 EGDFLFNAMVMMTRQRIKRVMVCLGNQAVGLLSLIQILSAFSTHSHVLTLAIARAASIDE 294
             D LFNA+V+MT+  ++RV+V      VGLL    +L+  S HS V+ L +  A    +
Sbjct: 237 RDDLLFNALVLMTKHAVRRVVVTENGAIVGLLGQSDLLAVLSNHSQVIGLQVEHATDPAD 296

Query: 295 LALAANKQRELVESLMSRGVRTRFVMELIAAVNEQIIEKAFELVVPPALHDQCCLVVLGS 354
           L  A+    EL+ +L + GV+  F+ +L+  +N +I  K FEL+ PP L    CL+V+GS
Sbjct: 297 LRRASRAIVELIRTLHATGVKVSFIADLVTELNRRIFRKLFELLAPPDLLANSCLIVMGS 356

Query: 355 EGRGEQILKTDQDNALIIQDGLEWHQCQPIMETLTHTLLQLGYPLCPGKVMVNNPKWVRS 414
           EGRGEQ+LKTDQDN LI++DG +      I    T  L++ GYP CPG +MV+NP+W R 
Sbjct: 357 EGRGEQLLKTDQDNGLILRDGFDCPDLADIAADFTRHLVEFGYPPCPGNIMVSNPEWTRP 416

Query: 415 QSDWKRTLTDWVKAARPEQVMDIAIFADAHAVAGNRALLAPVKAHLQHLMAGQELILAEF 474
            + +K  L +WV        M++AIF DA  VAG+  LLA  K +L   +   ++   +F
Sbjct: 417 LAGYKDALFNWVHRPDEAAQMNLAIFYDAAPVAGDATLLAEAKDYLLSRLQDNQMFFTQF 476

Query: 475 TRPALNFSVPLTLFGNV--KSSKQGIDIKQGGIFPIVHGVRALSLEHAIDANNTFDRIEA 532
            RPAL+F  P  LF  +  +   + +DIK+ GIFPIVHGVRAL+LE      NT +RI+ 
Sbjct: 477 ARPALSFDTPSGLFAALFERRRAEAVDIKKAGIFPIVHGVRALALEKHRVETNTVERIQV 536

Query: 533 LVKKRVLEQETGDNLSEAFKLFLKLRLAQQL-----------GNQHSTNQLDFKQLDRTE 581
           L +   L+++   +L EAF +   +RL  ++                 N +   +L + +
Sbjct: 537 LAELGALDRKMAADLVEAFTILSTIRLKARVDLPDDGPEGEGAELAIDNLVHPDRLGKLD 596

Query: 582 RDLLRHSLHVVKKFKQWLGYHYQI 605
           RD  +  L +VK FK+ + +H+++
Sbjct: 597 RDQFKDCLALVKSFKELIAHHFRL 620